Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi690g00001 ATGGAGGCAGACTTTATGATCCGGCTTGGAGACAAAACACATGTTCCAATTGTAACCTTTTCAGCAACAAGCCCTGCTCTTGCTTCGCTTCAAAGTCCATATTTTTTCCAAATCGCACAAGATGATTCAGCTCAAGTGAAAGCTATAACGACAATTATCCAAGCTTTTGGGTGGAAAGAAGTGGTGCTCATTTACATAGACGATAGTTTTGGGGAAGGAGTCATTCCTTTCTTAACCAATGGTCTCCAACAAGCCTATGTTCGAGTTCCCTATCTCAGTGTCATTTCTCTTTCAGCCACCAATGAAGCTATCACTGAAGAGCTCTATAAGTTAATGACTATGCCAACTAGAGTCTTTATAGTGCACATGGTGCCACGCCTTGGCTCTCGCCTCTTCACCCTAGCAAAGCAAATTGGAATGATGGACCAAGGCTATGTTTGGATTGTAACTGATGGCATGACTAATTTGTTCAGCTCCTTAAACACTTCAGTCATGGAATCAATGGAAGGAGTATTGGGTGTGAGGCCTTATGTTCCAAGAACGAAAGAGCTTGATTATTTCAAAGCTCGATGGAAAAGAAAATTCTTACGAGATAATCCAACACACTTTGACACAAATTTGAATGTTTTTGGAATATGGGCTTATGATACTACTACAGCATTAGCAATGGCGGTTGAGAAAGTTGGAACCACCAACTTTGGCTTCCACGTAAGCAATTCTTCAAGCAACATTCTTGATTTTGAAAAGTTTGGCATTGCACAAAATGGTGAGAAGTTGCGTGAAGCCCTGTCGAACACTAGATTTAGAGGCCTTGGTGGTGATTTCAATATTCTTGGTGGGAAGTTACAAGCATCAACTTATGAGATAATTAATATGGTTGGTAATGGTGAAAAAAGGGTAGGATTTTGGACGCCTAAAAAGGGACTATCTAGAAATCTTAACGCAAAAGAACCCAAAATATATTCTTCTTCAAAAAACAATCTTGGTCCCATTATATGGCCAGGGGATACATACTCTATTCCAAAGGGATGGGAAATTCCCATAAAAGGCAAGAAGTTGAGGATAGGAGTTCCGATAAAAGAAAAAGATAGTTATACTCAGTTTGTGAAAATAACACCCGACCCTATTACCAATTCAACAGTGGTCACTGGATTTTGCATTGATGTCTTCAAAGCTGTGATAGATGTGTTGCCATATGCCTTACCATATGAGTTCATTCCATTTGCAAAGCCCGATGGTGAGATGGCGGGAGATTATAATGAGTTAGTCAGCCAAGTTTATTATGGGGTATTTGACGCTGTGGTGGGGGATACAACAATTATTGGAAATAGGTCAAACTACGTTGATTTCACAATGCCATACACAGAATCTGGGGAGAAAGTGGTGAGCAACTTGGGTAGATTTGTGGTTATTGTATGGGTGTTTGTGGTTTTAATTCTGGTTCAAAGTTACACTGCAAGCCTCACTTCCCTCTTAACAGTTGAACAACTACGCCCAACTGTTACAGATGTCCATCAACTCATCAAGAATAGGATGAATGTTGGTTATCTAAAAGGTTCTTTTGTTTATGGAATTTTGAAAGACTTAGGTTTCCAAGATTTCCAACTCAAAATTTATGAATCTCCAGAGGAATGTAATGAGCTTTTCAGAAAAGGTAGTACAAATGGTGGCATTGATGCTGCGTTTGATGAAGTTCCTTATGTGAAGCACTTTCTTGGAACTTATTGTTCTAAATATGTCATGGTTGAACCCAGGTTTAAAACTGGCGGCTTTGGTTATGTGTTCCCAAAAGGTTCCCCTCTTGTAGCTGACATTTCAAGGGCAATCCTCAATGTGACTCAAGGAGACAAAATGAGAGCAATTGAGAATGCATGGTTTAAGGAAAGCAATTGTGTGGAGTCTAATTCAGAAATTTCTTCTAAAAGTCTTGGCCTTGAAAGTTTTTGGGGTTTGTTTCTCGTTGCAGGGATTGCTTCCTTATTAGCACTCCTAATATTTGCATTAACATTCTTATATCAACATAGGCATATTTGGTTACACAATAATCCTAATACTTCAATATGGAGACGTATTGGAATCTTGATAAGGATATTTGACCAAAGAGACTTGGACTGTCACACATTCAAGAAAAGTGAAACTTGTAGTCCTCATCATGTATTAGGTGTAGTTGAGGCCTCGCCAAGTACACATTGCCCACAAAGTCCATCTAGTCAAACCGAGTCAAACATTTCCTTTTATGGAGACTTTAGTTCAGACCAGGGTGATGCTAAACCATAA 2277 0.3931 MEADFMIRLGDKTHVPIVTFSATSPALASLQSPYFFQIAQDDSAQVKAITTIIQAFGWKEVVLIYIDDSFGEGVIPFLTNGLQQAYVRVPYLSVISLSATNEAITEELYKLMTMPTRVFIVHMVPRLGSRLFTLAKQIGMMDQGYVWIVTDGMTNLFSSLNTSVMESMEGVLGVRPYVPRTKELDYFKARWKRKFLRDNPTHFDTNLNVFGIWAYDTTTALAMAVEKVGTTNFGFHVSNSSSNILDFEKFGIAQNGEKLREALSNTRFRGLGGDFNILGGKLQASTYEIINMVGNGEKRVGFWTPKKGLSRNLNAKEPKIYSSSKNNLGPIIWPGDTYSIPKGWEIPIKGKKLRIGVPIKEKDSYTQFVKITPDPITNSTVVTGFCIDVFKAVIDVLPYALPYEFIPFAKPDGEMAGDYNELVSQVYYGVFDAVVGDTTIIGNRSNYVDFTMPYTESGEKVVSNLGRFVVIVWVFVVLILVQSYTASLTSLLTVEQLRPTVTDVHQLIKNRMNVGYLKGSFVYGILKDLGFQDFQLKIYESPEECNELFRKGSTNGGIDAAFDEVPYVKHFLGTYCSKYVMVEPRFKTGGFGYVFPKGSPLVADISRAILNVTQGDKMRAIENAWFKESNCVESNSEISSKSLGLESFWGLFLVAGIASLLALLIFALTFLYQHRHIWLHNNPNTSIWRRIGILIRIFDQRDLDCHTFKKSETCSPHHVLGVVEASPSTHCPQSPSSQTESNISFYGDFSSDQGDAKP 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi690g00001 758 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 11 460 IPR015683 -
Sebi690g00001 758 CDD PBP1_GABAb_receptor_plant 1 313 IPR044440 -
Sebi690g00001 758 FunFam Glutamate receptor 352 466 - -
Sebi690g00001 758 FunFam Glutamate receptor 216 351 - -
Sebi690g00001 758 SMART GluR_14 352 628 IPR001320 GO:0015276|GO:0016020
Sebi690g00001 758 SUPERFAMILY Periplasmic binding protein-like I 5 335 IPR028082 -
Sebi690g00001 758 FunFam Glutamate receptor 47 205 - -
Sebi690g00001 758 Gene3D - 352 477 - -
Sebi690g00001 758 MobiDBLite consensus disorder prediction 727 749 - -
Sebi690g00001 758 Pfam Receptor family ligand binding region 2 295 IPR001828 -
Sebi690g00001 758 Gene3D - 216 351 - -
Sebi690g00001 758 Pfam Ligand-gated ion channel 628 658 IPR001320 GO:0015276|GO:0016020
Sebi690g00001 758 CDD GluR_Plant 351 626 - -
Sebi690g00001 758 PIRSF IGluLR_plant 1 462 IPR017103 -
Sebi690g00001 758 PIRSF IGluLR_plant 458 754 IPR017103 -
Sebi690g00001 758 Gene3D - 43 207 - -
Sebi690g00001 758 Gene3D - 503 630 - -
Sebi690g00001 758 Pfam Bacterial extracellular solute-binding proteins, family 3 379 627 IPR001638 -
Sebi690g00001 758 MobiDBLite consensus disorder prediction 726 758 - -
Sebi690g00001 758 FunFam Glutamate receptor 2.7 534 634 - -
Sebi690g00001 758 SUPERFAMILY Periplasmic binding protein-like II 331 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi690g00001 Sebi-Chr690 12539 15695 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi690g00001 1 714 Ion Channels AT4G31710 41.397 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi690g00001 K05387 - fve:101300329 692.189