Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi68g00072 ATGAGTTCCAATTCCAAACAAAACCAGCTTCCTATAGATCAAGAAACAGAGGTTGATGAAGCTTACCTCACTGCTCTGTTTCTAAGCTTTAGCAGGGTATTTCCTTCAATTCTGAATGCTGCTGTTGATCTCAATTTGTTTGAGATAATAGCTAAGGCACAAAGTTCATGTGGTTCTTCATCCTTGTCTGCCTCTGAAATTGCTTCTCAGTTTCCAAACCAACACTCAGAATTGGCAAAAAGGCTTGAACGCATGTTGCCTGTGTTGGCTAGTTATTCTCTTCTAACTTGCTCCATTCGCACCAGTGAAGATGGTAAAAGAGAAAGAGTTTATGCTCTCTCTCCCGTTGGTCAATACTATGTGTGTGACAATGACAGTGAATCTTTGGGCCCATTCTCATCTTTAGTGCATCGAGGATTTCATCAAGTTTGGAATGATGTAAAGGATGCATTTGTGGACCCTAATAGCATTAACCTTTTTCAGAAAGTTCATGGAGTACCTCTATTTCAATTTATGGAGCAAGATCAAGAGCTTAATCATATGTTTAACAAAGCAATGGCCCAAGCCAGCCCGTTAGAAGTGAAAATGATCCTTAAACAATATAAAGGATTTGAGGGATTATCAACACTGGTTGATGTAGGAGGTGGAGTAGGGCTATCCTTAAAATTGATTATTTCTGAATATCCTTCAATAAAAGGAATTAATTTTGATTTGCCTCAAGTGATTCAAGATGCACCACCTCACCCAGGGATTGAGCACGTTGGAGGAAGCATGTTTGAAAGTGTTCCGAATGGTGATGCCATCTTAATAAAACGTGTTTGTCATAATTGGTCCGATGAAGAATGTGTGAAGTTTTTAAGAAATTGTCACAAAGCTCTGCCAAAATATGGAAAGGTGATTCTTGTGGACTCTATAGCTCCGGAAGTTCCAGACTCAAGCACTATCTCTAAGCTTGCTAGTGTAATTGACAATTCCATGTTTTTAGTGCTTGGTGGAAAGTTAAGAACTGAAAAAGAATTTCAAACCTTATGTAGCAGCTCTGGATTTTCCAAATTCCATGTTGCTTGTAGAGGTTTATTAGCCATGTTAGGAGTGATGGAATTTTATAAATAA 1113 0.3845 MSSNSKQNQLPIDQETEVDEAYLTALFLSFSRVFPSILNAAVDLNLFEIIAKAQSSCGSSSLSASEIASQFPNQHSELAKRLERMLPVLASYSLLTCSIRTSEDGKRERVYALSPVGQYYVCDNDSESLGPFSSLVHRGFHQVWNDVKDAFVDPNSINLFQKVHGVPLFQFMEQDQELNHMFNKAMAQASPLEVKMILKQYKGFEGLSTLVDVGGGVGLSLKLIISEYPSIKGINFDLPQVIQDAPPHPGIEHVGGSMFESVPNGDAILIKRVCHNWSDEECVKFLRNCHKALPKYGKVILVDSIAPEVPDSSTISKLASVIDNSMFLVLGGKLRTEKEFQTLCSSSGFSKFHVACRGLLAMLGVMEFYK 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi68g00072 370 FunFam Uncharacterized protein 121 370 - -
Sebi68g00072 370 Pfam Dimerisation domain 37 90 IPR012967 GO:0046983
Sebi68g00072 370 Gene3D - 1 120 IPR036388 -
Sebi68g00072 370 PIRSF O-mtase 2 370 IPR016461 GO:0008168
Sebi68g00072 370 Gene3D Vaccinia Virus protein VP39 123 370 IPR029063 -
Sebi68g00072 370 SUPERFAMILY "Winged helix" DNA-binding domain 17 124 IPR036390 -
Sebi68g00072 370 Pfam O-methyltransferase domain 144 350 IPR001077 GO:0008171
Sebi68g00072 370 FunFam Caffeic acid 3-O-methyltransferase 2 120 - -
Sebi68g00072 370 CDD AdoMet_MTases 209 302 - -
Sebi68g00072 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 137 356 IPR029063 -
Sebi68g00072 370 PANTHER O-METHYLTRANSFERASE 28 358 IPR016461 GO:0008168
Sebi68g00072 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 370 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi68g00072 Sebi-Chr68 1848919 1850746 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi68g00072 1 356 Monolignol Biosynthesis Gene Families AT5G54160 46.369 1.77e-105 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi68g00072 - - gmx:100793053 491.115