Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi68g00050 ATGGAGCAAGAAGAATATACAAAGGAAGAAATTGATTGGAGTTACATAGAGTTCGTTGATAATCAAGATGTTCTTGATCTTATAGAGAAGCTTGTTCAAAACATCTACCAGAAACCTGGCGGTATTATTGCTCTTCTAGATGAGGCTTGTATGTTTCCAAGATCAACGCATGAAACATTTGCTGAAAAGCTATATCAAACATTTAAAGACAATAAACGCTTCAACAAGCCGAAGTTGTCTCGTACGGACTTCACTGTCAACCACTATGCTGGGCTTTTCCCACCTTTACCTGAGGAAACTACCAAATCAACAAAGTTCTCTTCTGTAGCCACTCAGTTTAAGCAACAACTGCAATCTTTGCTTGAAACACTGAATGCTACTGAGCCACACTACATTCGTTGCGTAAAGCCAAATAATCTTCTTAAGCCAGGGATATTCGAGAACAATAATATATTGCAACAGCTTCGATGCGGGGGAGTAATGGAGGCAATTAGGATAGTTGTGCTGGATATCCACAAGAAAGACCCTGATGAGATGACGGCTTGCAAGAGGCTTCTAGATAAAGCGAACCTTACAGATTATCAGGTTGGAAAGACAAAAGTGTTTCTGAGAGCAGGTCAAATGGCAGAACTAGATGCGTGTCGTGCTGAGGTCTTAGGAAAATCCGCAAGCATTATTCAAAGAAAAGTTCGCACATATTTTTGTCAGAAACACTACAATTCATTACGATTTTCTGCCATAGAACTACAAAGGGTTGTTAAAGGACAACTTGCACGCCATCAGTATGAATGCATGAGAAGGGAAGCTGCTTCTTTGAAAATCCAGAAATACTTCCGCATGTATCTTTCCAAAAGTTCTTATAAAGATACTTATGTCGCAGCTATTTATATTCAAACTGGTATGCGAGGGATGGCTGCTAGAAATGACCTTAGGTTCAGGAGGCGAACACAAGCTGCAATTGCAATTCAGGCTGCTAAAGAAGCCAAGGCTCTAGAAGCTGCCAAAATTAATCTAGAAAAGCAAGTTGAAGAACTAACTTTGTGTCTACAAACAGAGAAGGAAATGAGGGAAGCCAAGACACAGGAAAATGAAAAATTACAACATGCTTTACAAGAGATGGAGCTTCAATTCCAAGAAACTAAGACAATACTCATCCAAGAACGTGAGGATGCTAGAAAAGTAGCTGAGGAATGTGAGGCTGCCAAGAAAGTAGCTGAAGAATGTGAGGCTGCCATGAAAGAAGCAGAAAAAACTCGGGAGACTGTTAATGTTGTTGACAATGAATTGATTAATAAGCTTACAGCAGAAAATGAAGAACTCAAGGAGCTGGTTAATTCATTGGAAAAGAAAACTACACAGGAGTTTCCAGTTAATGTCACTGACAATGAACTAATCAATAAGCTTACTACAGAAAATGAACACCTTAAGGATCTGGTTAATTCATTAGAAAAGAAAACTATGCAGGAGTTACCTGTTAATGTCAGTGACAATGAACAAATCAATAAGCTTACTGCAGAAAATGAACACCTTAAGGATCTGGTTAATTCATTAGAAAAGAAAACTATGCCGGAGTTACCTGTTAATGTCAGTGACAATGAACAAATCAATAAGCTTACTGCGGAAAATGAACATCTTAAGGATCTGGTTAATTCATTAGAAAAGAGAACTATGCAGGATTTACCTGTTAATGTCAGTGACAATGAAAAAATTAATAAGCTTACTCCAGAAAATGAACACCTTAAGGATTTGGTTAATTCATTAGAAAAGAAAACTATACAGGAGTTACCTGTTATTGTCACTGACAATGAACAAATTAATAAGCTTACTGCAGAAAATGAACAACTTAAGGATCAGGTTAATTCATTGGAAAGGAAAATTGATGAAATGGAGAGGAAATACGAAGAAAGTAATAGACTTAGTGATGAGCGCATGAATCAAATTATAGAGACAGAATCAAAGATAATTGATCTAAAGACAAACATGCAGAGACTTGAAGAAAAAGTCTCTGACATGGAAACTGAGAATCAAGTTTTACGGCAGCAAGCCCTGTTGAGTTCATCATCTAAAAGAATGTCAGGGAAGTTTTCAGCTTCTGTAATTCCGCCTTCAGAAAATGGTCAACAGGCACCAGCTAGTTCTACACCAGCAAAAACATTTGGTTCAGAAACGTTAAGGAGATCTCAAATGGAGAGGCATCAAGAGAGTGTAGATGCTCTTTTCAAATGTGTGACCAAAGATCTTGGGTTCTCTGAAGGAAAACCTATTGCAGCATTTACAATTTATAACTGTCTGTTACATTGGAAATCTTTTGAAGCAGAAAAGACAAGTATATTTGATCGTCTTATTCAGCTAATTGGCTCTGCAATAGAGGATCAAGAAAATAATGATTGTATGGCTTATTGGTTGTCCAATACATCTACTTTGTTTTTCCACCTTCAGCGATGTCTAAGAGTACCTACAGCAAGAAAACCTCCCACTCCAACATCATTTTTTGGGAGAGTGGCCCAGAGTTTCCGCTCATCTTCCAATAGTCTTTCCGGTAATGCACTTGATGTAGTGCAACAGGTCGATGCCAAGTATCCAGCTCTGCTTTTCAAACAACAACTTGCAGCTTATGTAGAAAAGATATATGGAATCATTAGAGAAAATTTGAAGAAAGATTTGTCACCTTTGCTTTCTTCTTGCATTCAGGCACACAAAACATCAAATGACAGCAGCCAACCAAATGGTTCTTGGCTCAGCATTACCGAATGCCTTAATAGAATTCTCAATATTCTAAAAGAAAATTATGTGCCTCAAATTCTAGTTCAGAGGTTATTTAATCAGATTTTTCAATACATCGATGCAGAAATCTTTAATAGCCTTCTTTCAGATAAAGAATGTTGCACATTTAACAATGGAGAATATGTAAAATCAGGATTGGCTGAATTAGAACTATGGTGTAATGAAGTAACAGAGGAGTACGCTGACTCATCTTTGGATGAACTCAAATATGTGACACAAGCAGTTAGATTCTTGGTTACACAACAAAAGGTTGGACTATCTTATGATGATCTTACAAATGACCTTTGCCCGGCCTTGAGTTCTCATCAACTTTATAGAATATCTACACTTTATGAGGATGACAATGACAAGGACAATACGCAGAGTGTATCACCAGATGTCACTACTAGATTGAAGCTTCTAATGACGGATGGTGAAGATGGTGATGACAAATCCTTCTTGTTGGAAGACAATTCAAGTCTCCCTATTATCGTTGAAGAGATTTCTAGTTCCCATAAAGATAAAACCGTTCCAAAAGTAAAACCTCCTGCAGAACTTCTTGAGAATGCATCCTTCCAATTTTTACATGATTATTATTAG 3363 0.3741 MEQEEYTKEEIDWSYIEFVDNQDVLDLIEKLVQNIYQKPGGIIALLDEACMFPRSTHETFAEKLYQTFKDNKRFNKPKLSRTDFTVNHYAGLFPPLPEETTKSTKFSSVATQFKQQLQSLLETLNATEPHYIRCVKPNNLLKPGIFENNNILQQLRCGGVMEAIRIVVLDIHKKDPDEMTACKRLLDKANLTDYQVGKTKVFLRAGQMAELDACRAEVLGKSASIIQRKVRTYFCQKHYNSLRFSAIELQRVVKGQLARHQYECMRREAASLKIQKYFRMYLSKSSYKDTYVAAIYIQTGMRGMAARNDLRFRRRTQAAIAIQAAKEAKALEAAKINLEKQVEELTLCLQTEKEMREAKTQENEKLQHALQEMELQFQETKTILIQEREDARKVAEECEAAKKVAEECEAAMKEAEKTRETVNVVDNELINKLTAENEELKELVNSLEKKTTQEFPVNVTDNELINKLTTENEHLKDLVNSLEKKTMQELPVNVSDNEQINKLTAENEHLKDLVNSLEKKTMPELPVNVSDNEQINKLTAENEHLKDLVNSLEKRTMQDLPVNVSDNEKINKLTPENEHLKDLVNSLEKKTIQELPVIVTDNEQINKLTAENEQLKDQVNSLERKIDEMERKYEESNRLSDERMNQIIETESKIIDLKTNMQRLEEKVSDMETENQVLRQQALLSSSSKRMSGKFSASVIPPSENGQQAPASSTPAKTFGSETLRRSQMERHQESVDALFKCVTKDLGFSEGKPIAAFTIYNCLLHWKSFEAEKTSIFDRLIQLIGSAIEDQENNDCMAYWLSNTSTLFFHLQRCLRVPTARKPPTPTSFFGRVAQSFRSSSNSLSGNALDVVQQVDAKYPALLFKQQLAAYVEKIYGIIRENLKKDLSPLLSSCIQAHKTSNDSSQPNGSWLSITECLNRILNILKENYVPQILVQRLFNQIFQYIDAEIFNSLLSDKECCTFNNGEYVKSGLAELELWCNEVTEEYADSSLDELKYVTQAVRFLVTQQKVGLSYDDLTNDLCPALSSHQLYRISTLYEDDNDKDNTQSVSPDVTTRLKLLMTDGEDGDDKSFLLEDNSSLPIIVEEISSSHKDKTVPKVKPPAELLENASFQFLHDYY 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi68g00050 1120 Coils Coil 391 421 - -
Sebi68g00050 1120 ProSiteProfiles IQ motif profile. 242 271 IPR000048 GO:0005515
Sebi68g00050 1120 Gene3D Kinesin motor domain 128 163 IPR036961 -
Sebi68g00050 1120 ProSiteProfiles Myosin motor domain profile. 1 91 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi68g00050 1120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 269 IPR027417 -
Sebi68g00050 1120 ProSiteProfiles Dilute domain profile. 779 1065 IPR002710 -
Sebi68g00050 1120 ProSiteProfiles IQ motif profile. 293 319 IPR000048 GO:0005515
Sebi68g00050 1120 MobiDBLite consensus disorder prediction 694 720 - -
Sebi68g00050 1120 SMART DIL_2 938 1045 IPR002710 -
Sebi68g00050 1120 SMART iq_5 266 288 IPR000048 GO:0005515
Sebi68g00050 1120 SMART iq_5 218 240 IPR000048 GO:0005515
Sebi68g00050 1120 SMART iq_5 289 311 IPR000048 GO:0005515
Sebi68g00050 1120 SMART iq_5 241 263 IPR000048 GO:0005515
Sebi68g00050 1120 ProSiteProfiles IQ motif profile. 267 293 IPR000048 GO:0005515
Sebi68g00050 1120 Coils Coil 430 453 - -
Sebi68g00050 1120 Coils Coil 321 383 - -
Sebi68g00050 1120 Pfam DIL domain 939 1042 IPR002710 -
Sebi68g00050 1120 Coils Coil 598 681 - -
Sebi68g00050 1120 Gene3D - 269 321 - -
Sebi68g00050 1120 Gene3D - 218 268 - -
Sebi68g00050 1120 Gene3D - 1 93 - -
Sebi68g00050 1120 SMART MYSc_2a 1 217 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi68g00050 1120 Pfam Myosin head (motor domain) 99 167 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi68g00050 1120 Pfam Myosin head (motor domain) 2 91 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi68g00050 1120 Pfam IQ calmodulin-binding motif 269 288 IPR000048 GO:0005515
Sebi68g00050 1120 Pfam IQ calmodulin-binding motif 221 239 IPR000048 GO:0005515
Sebi68g00050 1120 FunFam unconventional myosin-Va 269 317 - -
Sebi68g00050 1120 ProSiteProfiles Myosin motor domain profile. 92 166 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi68g00050 1120 Gene3D - 164 214 - -
Sebi68g00050 1120 Coils Coil 465 485 - -
Sebi68g00050 1120 Gene3D - 106 127 - -
Sebi68g00050 1120 PANTHER MYOSIN 610 1044 - -
Sebi68g00050 1120 CDD MyosinXI_CBD 730 1087 IPR037975 GO:0007015
Sebi68g00050 1120 Coils Coil 500 520 - -
Sebi68g00050 1120 Coils Coil 535 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi68g00050 Sebi-Chr68 1525043 1537750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi68g00050 1 909 Myosins gene family AT1G04600 49.135 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi68g00050 K10357 - gmx:100791031 1454.11