Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi68g00049 ATGTGGGAGCATAGTCTCCCAGCTAGTTTACATGCTGCTCAACTCAATTTTGTAGTTGGATCTCATGTTTGGATTGAGGACTCAGATGAAGCTTGGTTAGATGGAGAAATCCTAGAAACTAAAGATGAAGAGATCACAGTTAACTGCGAATCAGGCACCAGGTCCAATCCTGTTTTAGAAGCATTTGGCAATGCAAAGACTGTCAGGAATAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAGTTTGATCAAAAGGGGAGAATTTCAGGAGCTGCTATCAGAACTTATTTGCTGGAACGTTCCCGTGTCTGTCAAGTTTCTGATCCTGAGAGAAATTATCATTGCTTTTACATGCTTTGTGCTGCAACCACAAGAGATTGGCTCTGCTTGATAAAATGGGAGTTAGGCTATATAAAATTACTGCATAGGTTGAAATTGGGAAATCCAAGAGAATTTCATTACCTTAATCAATCAAATTGTTATGAGCTGGATGGGGTGGATGATTCTAAGGAATACCTTGCAACTAGGAGAGCTATGGATGTTGTTGGGATCAACTCTGATGAGCAGGATGCTATATTTCGAATAGTAGCTGCTGTACTTCATTTAGGAAACATTGAATTTGTCAAGGGAGCAGATGATGGAGAAGATTCCTCTGAACCCAAGGATGAACAATCTCGTTTCCACCTAAAAACTGCAGCTGAACTTTGA 714 0.3992 MWEHSLPASLHAAQLNFVVGSHVWIEDSDEAWLDGEILETKDEEITVNCESGTRSNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAATTRDWLCLIKWELGYIKLLHRLKLGNPREFHYLNQSNCYELDGVDDSKEYLATRRAMDVVGINSDEQDAIFRIVAAVLHLGNIEFVKGADDGEDSSEPKDEQSRFHLKTAAEL 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi68g00049 237 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 18 71 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sebi68g00049 237 Gene3D - 113 185 - -
Sebi68g00049 237 PANTHER MYOSIN 50 237 - -
Sebi68g00049 237 FunFam Myosin heavy chain 139 182 - -
Sebi68g00049 237 Pfam Myosin N-terminal SH3-like domain 20 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sebi68g00049 237 MobiDBLite consensus disorder prediction 213 237 - -
Sebi68g00049 237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 236 IPR027417 -
Sebi68g00049 237 SMART MYSc_2a 1 237 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi68g00049 237 Gene3D Kinesin motor domain 53 112 IPR036961 -
Sebi68g00049 237 ProSiteProfiles Myosin motor domain profile. 1 237 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi68g00049 237 Gene3D Myosin VI head, motor domain, U50 subdomain 187 236 - -
Sebi68g00049 237 Pfam Myosin head (motor domain) 54 224 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi68g00049 Sebi-Chr68 1519091 1523241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi68g00049 12 53 Myosins gene family AT1G04600 59.524 9.53e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi68g00049 K10357 - gmx:100788123 296.204