Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi68g00039 ATGGCAAAAAGTCGGTTGAAAACTTTAACTGAGTTAAGACGTGTTAGAGTGGTTGCTCAGATCCTAATGGTACATCGCTGTGGCAAATGGGTAAAAGTCTCTAGTACAGAACTTTTGCCTGGGGATGTTGTCTCTATAGGTCGTGGAGAGAAGTCTGTACCTGCAGATATGCTTATATTGGCTGGGAGTGCCATTGTGAATGAAGCTATTCTCACAGGTGAATCTACTCCTCAATGGAAGGTTGGTATTCCTTTCCTTTTCTTCTAA 267 0.4232 MAKSRLKTLTELRRVRVVAQILMVHRCGKWVKVSSTELLPGDVVSIGRGEKSVPADMLILAGSAIVNEAILTGESTPQWKVGIPFLFF 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi68g00039 88 Pfam E1-E2 ATPase 22 80 - -
Sebi68g00039 88 Gene3D - 1 85 - -
Sebi68g00039 88 SUPERFAMILY Calcium ATPase, transduction domain A 21 82 IPR008250 -
Sebi68g00039 88 PANTHER CATION-TRANSPORTING ATPASE-RELATED 2 84 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi68g00039 Sebi-Chr68 1213083 1213470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi68g00039 1 83 Primary Pumps ATPases AT5G23630 74.444 1.24e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi68g00039 K14950 - gmx:100789385 142.51