Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi68g00019 ATGGAACCTAAGTGGGGCGGCGTTCTGGCGGCGTCGTCGATTTTCTCCGCCTTCGACGACCTGAAGTGGATCGCAACGGAGTTCGATCAAGAACTTTTCACGAAGCGGCCGGTGGCCGGAGAAGTCGAGACGGCCAACGGATCAACCAACGACGACGACAACGACGTGAAACCGTGCAAGGTGGATCCATTCACCGGCGGCGGCGTTTTCTCCGGTCAAATCAACGGCGCCGCCACCGCCGCTTCTTTCAAAAATCTGGATGCGGTAACTGCATTTTCAACATGTGGTGGACTAACAGATAATACACTTATCTCCCCAAACCTCACTTCCAAGCATTCAACCATCTCTGCAATTGATTCTCAATCATCCATTTGTGGTACTGTAACCAGCCCGGTGTCTGCTAATAAATCAAACAGCAGAGATGATCAAACAAAAGGAGTCGTTACAAGCGGTTCCTCGCGTGATCCATCTGATGAGGATGATGAAGCAGGTCCTTGTGAACAAAGCACTAACCCTATTGACGTGAAGCGCCTTAGAAGGAAGGTTTCTAATCGCGAGTCTGCCAGGAGGTCCAGAAGAAGAAAACAAGCACATTTGGCTGACCTGGAGGTGCAGGTTGAACAGCTGAGGTTGGAAAATGCAACCCTATTTAAGCAGCTTACAGATGCCAGCCAACAATTTCGTGAGGCTGACACGAATAACCGAGTCCTAAAATCAGATGTAGAAGCTCTGAGAGCTAAGGTGAAGTTAGCAGAGGATATGGTCACTCGGGGCTCTTTCACCACTATTAACAACCAGCTTTTCCAAAACCAGAGTCAATTGACAACCACACCACAACTCAACACGAGTAATATGCGCCGCATGGCACATGTCTCGCCCACAATCACCATCAATGGGAATGAAGCAGCTTCATATGGTGGTGGTGCACCAAATTCAGCTCTTGGGCTTGGAGACTTTGATGTAACTTGCAGTGATTTCAACAATGGAGTCAATAGCGATGCTGTGAGCTCTCTGACTAACATGTGGCGTTAA 1032 0.4893 MEPKWGGVLAASSIFSAFDDLKWIATEFDQELFTKRPVAGEVETANGSTNDDDNDVKPCKVDPFTGGGVFSGQINGAATAASFKNLDAVTAFSTCGGLTDNTLISPNLTSKHSTISAIDSQSSICGTVTSPVSANKSNSRDDQTKGVVTSGSSRDPSDEDDEAGPCEQSTNPIDVKRLRRKVSNRESARRSRRRKQAHLADLEVQVEQLRLENATLFKQLTDASQQFREADTNNRVLKSDVEALRAKVKLAEDMVTRGSFTTINNQLFQNQSQLTTTPQLNTSNMRRMAHVSPTITINGNEAASYGGGAPNSALGLGDFDVTCSDFNNGVNSDAVSSLTNMWR 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi68g00019 343 MobiDBLite consensus disorder prediction 129 172 - -
Sebi68g00019 343 FunFam BZIP transcription factor 174 225 - -
Sebi68g00019 343 SUPERFAMILY Leucine zipper domain 176 226 IPR046347 GO:0003700|GO:0006355
Sebi68g00019 343 Coils Coil 234 254 - -
Sebi68g00019 343 SMART brlzneu 172 236 IPR004827 GO:0003700|GO:0006355
Sebi68g00019 343 Coils Coil 185 226 - -
Sebi68g00019 343 PANTHER BASIC LEUCINE ZIPPER 63 95 312 - -
Sebi68g00019 343 Pfam bZIP transcription factor 175 223 IPR004827 GO:0003700|GO:0006355
Sebi68g00019 343 CDD bZIP_plant_GBF1 177 228 IPR045314 GO:0003700|GO:0006355
Sebi68g00019 343 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 174 237 IPR004827 GO:0003700|GO:0006355
Sebi68g00019 343 Gene3D - 175 232 - -
Sebi68g00019 343 MobiDBLite consensus disorder prediction 129 153 - -
Sebi68g00019 343 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 179 194 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi68g00019 Sebi-Chr68 429052 432964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi68g00019 119 342 bZIP Transcription Factor Family AT5G24800 48.485 3.73e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi68g00019 bZIP_1 9.6e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi68g00019 K25784 - gmx:778193 384.03