Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi689g00013 ATGTTTACGCGAAGCCGGCGTTTCCCTTCGTCTTCTTCTTCATCCTCTGAGAATAGGTCCTCCGTTTCAGAAAATTCAAGCAAGAAGGTCAATGCCGTGAAGACCCACTTGAAAAAGAAGCGTCCCGCTCTCACTGACGTATCCAATAACAGAAATGCCTCTATTTCAAGGACCTCTGTTGGTGCTCCATCAAAGCCTACGGTTCCATGCATGTCCAAAACTGCTAGTGCTAAGACAAAGAAGGATTCTATTGCCAGTACGCAGAAAAAAGTTATTTCTGGGAACACTGTAAGCCTAAAATCAAGTGGGTTGGTACTTTCCAAAGACGCATGTTCTACCGGAACAAATCAACCTAAAACTGGGGTTGAAACCTTCCTTGCTCCAAGCACCGATAGCACTGTTTGTCCTGATTCCAATAGTGGGGTTTGTGCTCCGAGATGGATGAGCACTTCTTTAAGTAAATTGTTCAGCAGTTCAGTTTCATTGGATGAGAGCATGTCTACCAGTGATTCTCTGATGAGTCCGGAATTTGAATATATCGACAATGATGATGCCATATCTATCAAATCAATTGAAAATAGGACTTGTAGCATTCTCAATATTTCAGACTCTTTAACAATAGAAGGGAAAATATTTGGGAGTGATACCATCATGAAGACAGAAGCAAATGAAGTCGTGGATATTGACTACAATATCAAGAACCCACAGTTCTGTGCATCCATTGCCCATGAAATCTATGAATATTTGCGTGTATCTGAGGAAATTAAAAGGCCGTCTATGGACTATATGGAGAAGATACAGAAAGACCTCAATGCTAGCATGCGGGCAACACTTATTGATTGGCTTGTGGAGGGTTCATTAAACTTGCTTGGGCCCTTCTCTCATAACGAGAGAGAACATGAGAACTATATCAAATACGAGGAGATCTGTGCCCCTAAGGTGGAAGAGTTCTGTTACGTAACTGATAATACATATTCTAGGGAGCAGGTATTGCAGATGGAATCTGCCGTGCTGAGTTTCTTGAAGTTTGAAATGACCGCTCCTACAACTAGATGTTTTTTAAGGCGCTTCATTATTGTTGCCCAACAAACCTGTGAGGTTCCATTGATGCAGTTGGAGTATTTGGCAGACTATCTCGCAGAGTTATCTCTTCTAGAGTATGGTATGCTCAAGTACACCCCGTCCATAATAGCTGCATCAGCCACTTTCTTGGCTATATACATACTACTTCCTAGGAAGAAACCTTGGAATTCTATGCTAAGACATTACACAGGTTACCAAGCATTTGAATTGCGTGGATGTGTCAAGGGATTGCACTGGTTGTACTGTTTTGGCTGTCATAATTTACCTGCCATCAGGGAGAAATACAGTCAGCATAAGTTCAAGTTTGTGGCAAAGAAGTATTGTCCTCCATCAATACCTGAAGAGTTAAGGGAAGTAATTCTCCTTACTCATCTTGCCATGTGGAATTTTGCCTATGCTAATTCGGTGCCAATTATTAGAAATTCAAGCTACTGCGCCATGTCCATTTAG 1533 0.4168 MFTRSRRFPSSSSSSSENRSSVSENSSKKVNAVKTHLKKKRPALTDVSNNRNASISRTSVGAPSKPTVPCMSKTASAKTKKDSIASTQKKVISGNTVSLKSSGLVLSKDACSTGTNQPKTGVETFLAPSTDSTVCPDSNSGVCAPRWMSTSLSKLFSSSVSLDESMSTSDSLMSPEFEYIDNDDAISIKSIENRTCSILNISDSLTIEGKIFGSDTIMKTEANEVVDIDYNIKNPQFCASIAHEIYEYLRVSEEIKRPSMDYMEKIQKDLNASMRATLIDWLVEGSLNLLGPFSHNEREHENYIKYEEICAPKVEEFCYVTDNTYSREQVLQMESAVLSFLKFEMTAPTTRCFLRRFIIVAQQTCEVPLMQLEYLADYLAELSLLEYGMLKYTPSIIAASATFLAIYILLPRKKPWNSMLRHYTGYQAFELRGCVKGLHWLYCFGCHNLPAIREKYSQHKFKFVAKKYCPPSIPEELREVILLTHLAMWNFAYANSVPIIRNSSYCAMSI 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi689g00013 510 MobiDBLite consensus disorder prediction 1 81 - -
Sebi689g00013 510 Pfam Cyclin, N-terminal domain 244 284 IPR006671 -
Sebi689g00013 510 Pfam Cyclin, N-terminal domain 305 345 IPR006671 -
Sebi689g00013 510 FunFam Cyclin A1 336 466 - -
Sebi689g00013 510 SMART Cyclin_C_2 348 470 IPR004367 -
Sebi689g00013 510 PIRSF Cyclin_A_B_D_E 1 289 IPR046965 GO:0016538|GO:0044772
Sebi689g00013 510 PIRSF Cyclin_A_B_D_E 304 480 IPR046965 GO:0016538|GO:0044772
Sebi689g00013 510 Gene3D - 305 346 - -
Sebi689g00013 510 Gene3D - 258 284 - -
Sebi689g00013 510 PANTHER CYCLINS 305 462 IPR039361 -
Sebi689g00013 510 CDD CYCLIN_AtCycA-like_rpt2 348 461 - -
Sebi689g00013 510 Gene3D - 244 257 - -
Sebi689g00013 510 Gene3D - 347 466 - -
Sebi689g00013 510 SUPERFAMILY Cyclin-like 233 345 IPR036915 -
Sebi689g00013 510 SMART cyclin_7 352 440 IPR013763 -
Sebi689g00013 510 MobiDBLite consensus disorder prediction 1 30 - -
Sebi689g00013 510 MobiDBLite consensus disorder prediction 46 81 - -
Sebi689g00013 510 SUPERFAMILY Cyclin-like 348 472 IPR036915 -
Sebi689g00013 510 Pfam Cyclin, C-terminal domain 348 466 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi689g00013 Sebi-Chr689 243305 248155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi689g00013 145 477 Core Cell Cycle Gene Families AT1G44110 52.473 8.86e-121 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi689g00013 K06627 - qsa:O6P43_019779 466.848