Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi689g00003 ATGGTTGATAGGGTCGAGACGGTTGCCAGATTCGCACAGTGGAAAATCGACAACTTCGGACCTTGTTCCTACAAAAAATCTGAACCTTTCAAGGTCGGAATCTGGAACTGGTGCTTTTCAATAGTGAGGAATAGGTACCTCTACATACACCTCTTTCCAGAACCTTCGCGGGTTTCTAAGGAACACCCACCCCTTGCTCGATTCATTCTTCGAGTCTCAAATGCTGGCTCATCCCGCAAGTTTCACATTTCTCCTGTTCATGAAAAGCTGATTAGGACACATGATGACTTTGTCTGGCCTGTTGATACTACTTTCGTTGGCCGCTTCATTATTGATGTGGAGTTTCTAGACCTGAAGAAATGCCCTCTGAATGGTGGAGAAGCTAGTTCTATATGGCCATCTGATGGAAATTCACAATCCATTGCAGCTCAAAGTAGTTCTCTTCGTTGCCTCTCTCGCATGCTTGATGAAGGTATACATGCTGACCTAACCATTATCACTTCTTATGGTACGCTGAGAGCTCACAAGGCAGTCTTGTCCGCAAGTTCTCCTGTGTTCCAGAGCATGTTTCATCACAACCTGAAAGAAAAAGAGTCATCTACAATCCATATAGAAGACATGTCACTTGAATCCTGCATGGCTCTTTTAAGTTACTTGTATGGAACAATTAAACAAGAAGATTTCTGGAAGCACCGGCTTGCATTGCTCCAAGCAGCAAATAAATATGACATTGCTGGTCTCAAAGACTTCTGTGAGGAAAGCCTTCTTGAAGATCTTAACTCAGGAAATGTTCTGGATATGCTAAATGAGGCTTGGTTTTATCAATTACACAAGTTAAAGAAAGGATGTTTGATGTTCTTATTTGAATTTGGTAAAATATATGATGTCAGAGATGATGAAATAAAAAACTTTTTCCAGCATGCAGATAGGGAGCTAATGATGGAGATGTTTCAGGAGGTGCTTACAATTTCGAACCATGTATAG 984 0.4136 MVDRVETVARFAQWKIDNFGPCSYKKSEPFKVGIWNWCFSIVRNRYLYIHLFPEPSRVSKEHPPLARFILRVSNAGSSRKFHISPVHEKLIRTHDDFVWPVDTTFVGRFIIDVEFLDLKKCPLNGGEASSIWPSDGNSQSIAAQSSSLRCLSRMLDEGIHADLTIITSYGTLRAHKAVLSASSPVFQSMFHHNLKEKESSTIHIEDMSLESCMALLSYLYGTIKQEDFWKHRLALLQAANKYDIAGLKDFCEESLLEDLNSGNVLDMLNEAWFYQLHKLKKGCLMFLFEFGKIYDVRDDEIKNFFQHADRELMMEMFQEVLTISNHV 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi689g00003 327 PANTHER OS08G0495500 PROTEIN-RELATED 3 325 IPR044714 -
Sebi689g00003 327 Pfam BTB/POZ domain 153 257 IPR000210 GO:0005515
Sebi689g00003 327 CDD BTB_POZ_ZBTB_KLHL-like 160 242 - -
Sebi689g00003 327 SUPERFAMILY POZ domain 145 257 IPR011333 -
Sebi689g00003 327 Gene3D Potassium Channel Kv1.1; Chain A 134 288 IPR011333 -
Sebi689g00003 327 ProSiteProfiles BTB domain profile. 161 220 IPR000210 GO:0005515
Sebi689g00003 327 SMART BTB_4 161 259 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi689g00003 Sebi-Chr689 50103 53776 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Sebi689g00003 BTB 2.8e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi689g00003 K10523 - gmx:100787262 572.778