Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi687g00018 ATGGCAGGTCCAGAAGTTGCAAATGGGAACGGCTCATTGAACTTGAAGCCAAGTGACACCAAAGGAAAGACCATTACTTGCAAGAAATTGGAGGTTCGAATCAAGATTCTCTTTACTTCAATTTGTCACACCGATCTCAGCGCTTGGAATGGAGAGAATGAGTCTCAGCGTGCTTATCCTCGGATTTTTGGGCATGAAGCTTCCGGGGTTGTGGAGAGTGTGGGGGAAGGTGTGAGTGATATGAAAGAAGGGGACATTGTGGTGCCAATATTCAATGGGGAGTGTGGGGAGTGTAGCTATTGCAAGTGTGAGAAAACCAACATGTGTGAGAGGTTTGGGGTGAACCCCATGAAAAAAGTGATGTATGGAGATGGCAAAGTAGATTCTCCACCATGGATGGAAAACCCATCTTCCATTTCTTGA 423 0.4586 MAGPEVANGNGSLNLKPSDTKGKTITCKKLEVRIKILFTSICHTDLSAWNGENESQRAYPRIFGHEASGVVESVGEGVSDMKEGDIVVPIFNGECGECSYCKCEKTNMCERFGVNPMKKVMYGDGKVDSPPWMENPSSIS 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi687g00018 140 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 64 78 IPR002328 GO:0008270|GO:0016491
Sebi687g00018 140 Pfam Alcohol dehydrogenase GroES-like domain 31 115 IPR013154 -
Sebi687g00018 140 SUPERFAMILY GroES-like 28 126 IPR011032 -
Sebi687g00018 140 Gene3D - 27 126 - -
Sebi687g00018 140 PANTHER ALCOHOL DEHYDROGENASE 28 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi687g00018 Sebi-Chr687 496798 497638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi687g00018 31 112 Monolignol Biosynthesis Gene Families AT4G39330 37.349 2.62e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi687g00018 K00001 - gmx:100815166 197.208