Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi687g00016 ATGGCATTTGAAGGTGAGGGTGGAGCGCTTGTGGGAGATGGCGAGAAAATCCAGGCGTTTATCAGGAAACCAATGATGAAAAAGTTCAAGGATCTTGTGACTAACCTCACACAGTGTGATGCTATGAATGTGCCTCAGCTCGGGGTCGTTCCATGTAATTCCCAAATATTAGAAACCGGTGGTCATAGTGACTATTTGATTGATTTTATTGGGGTGTTAGTCGCTGTTTCTGATGAAAAGAGGTCTGTCCGTGATGGGCGCACAACTAGAGTGGTGCAAATGGAGTTGATAGATGACAAGAGAAAGGCGTATTGTGCCATTTTTGGGAACTACGTTGACCTTGTAAAGGACTTTCTCCGAGACACAGGAAGTGTCGTTGTGATGCAAAATGTTCTCAACACGAAACGTATACTATGGAACCCTATCATTCCACAAGTTGTGGATTTTAAAGAACGTGCTTCACCTGTGGAGGAGTTTCTGCATATGTTTCCCAAGAAGACTATATCCGAGCTCCATGAAACCGAAGAGTGGTGGTACTCTGCTTGTAAGTGCAATAAGGTTGTGACCGTTGATGGTGACAACTATTATTGTGCTTTTTGCGCTTCTAATGCCACTAAAGTTAGCCCTAGGTATAAGTTGAAGGTACAGGTTTTTGACGGGGAAGACAGAGCTGCGTTTGTCATGTTTGATAGTGATGCTGAGCTGATGACTGGAATTTCTTGTGCTAGTCTGCTTGCTCATAACAAGGATGGAGTGATGGATCATCTCACGCATGAGCTTGAGGATTTGGGTGGTAAGGACTTTCTCTTCAAGGTGGAAAAGGTGTGCGACTTTGCATTCGAATATGATGATACATTTAAGGTCAAAAGGTTCTGTGTTGAGGAAGAAATAATAGAGCATTTCAAAAAGCTGAAGAAACCCTCAACTCCTAAAGTTGATAACACGTTCGACCCGGCTCCATATGAGGATGTTGATACAAAAGAAGGGTCTTTCTGCGTTGCTGAATATTTGTCTGATCAAGCTGGGTGTCCCATTGGAACTGGGGGTGGGGATGTAAACGAGGCAAGTTGCAACGGTGTTAGAAAAGAGCGTGGGAAGGGGAAGATGGTTAATGCATGA 1119 0.4388 MAFEGEGGALVGDGEKIQAFIRKPMMKKFKDLVTNLTQCDAMNVPQLGVVPCNSQILETGGHSDYLIDFIGVLVAVSDEKRSVRDGRTTRVVQMELIDDKRKAYCAIFGNYVDLVKDFLRDTGSVVVMQNVLNTKRILWNPIIPQVVDFKERASPVEEFLHMFPKKTISELHETEEWWYSACKCNKVVTVDGDNYYCAFCASNATKVSPRYKLKVQVFDGEDRAAFVMFDSDAELMTGISCASLLAHNKDGVMDHLTHELEDLGGKDFLFKVEKVCDFAFEYDDTFKVKRFCVEEEIIEHFKKLKKPSTPKVDNTFDPAPYEDVDTKEGSFCVAEYLSDQAGCPIGTGGGDVNEASCNGVRKERGKGKMVNA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi687g00016 372 SUPERFAMILY Nucleic acid-binding proteins 167 276 IPR012340 -
Sebi687g00016 372 Gene3D - 53 155 IPR012340 -
Sebi687g00016 372 CDD RPA1_DBD_C 157 272 IPR047192 -
Sebi687g00016 372 Pfam Replication factor-A C terminal domain 171 289 IPR013955 -
Sebi687g00016 372 Gene3D - 156 300 IPR012340 -
Sebi687g00016 372 SUPERFAMILY Nucleic acid-binding proteins 60 153 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi687g00016 Sebi-Chr687 444503 446930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi687g00016 132 272 Core DNA Replication Machinery Family AT5G61000 28.472 8.30e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi687g00016 - - lja:Lj1g3v3385890.1 215.698