Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi687g00012 ATGGAGGATCATAGAATGGCAATTGAGGAGCTTGTGAGAGGGCGTGAGTTTGCTAATCAGCTTCGACAAATCATCAGTGGTGATGATGAGTCAAGAATATTAGGAACTCCATTTGCTCAACATCTAGTGAAGAATGTGCTCAGATCCTTTACCAACACCATCTTCCTTTTGGACAAATCCCATGAGGTTTCTCATGATCAGATGCAAAAAAGGGACTCTTCCTTGATTAGTAGTCCTGCTAAATCTGAGGACTCTCAAGAAAGTTGCAGGAGTTCCACCGATAAGTGTAGAAGAGGGTGTTACAAGAGAAGAAAAGATACACAAACATATTGGGAGAAAGTGTCAGAAATCCCAGAAGATGATGGCCATCTATGGAGAAAATATGGCCAAAAGGAAATCCTTAATGCCAAATACTCAAGGAGCTACTACAGGTGCACTCACAAGTTTGATCAGAGATGCCAAGCAACAAAACAAGTGCAGAGAATTCAAGAGAAGCCTCCATTGTATAAGACCATCTATTATGGCCACCACACTTGCAAAAACATCTTAAACCCTGACATCATACTTGATCCCAATTCTCCTTCTGACACTTCCATATTACTTAGCTTTAACAACACCTTCCCAACTCCATCCAAACAAGACTGCCCCTTTGTATCATCTCCTCCCTCACAATCAGAGAACAAGGAATGTAAGGAGGATGTTTCCTCATCTTCCTTATTGGATGATGATTACCTGCTCTCCCATGAGCCAACTACTTTTGATAATTTGTACTCAAGGCATGTCACTACTCTATCATCAACCCTTGAATCCGATAACAGGGATCTGTTTTCTAGTTTCTTGTGTGATTCGGTTGTGTTTGATGATGTTTTTCAGCCTTTTGTTCAATTTTGA 891 0.4074 MEDHRMAIEELVRGREFANQLRQIISGDDESRILGTPFAQHLVKNVLRSFTNTIFLLDKSHEVSHDQMQKRDSSLISSPAKSEDSQESCRSSTDKCRRGCYKRRKDTQTYWEKVSEIPEDDGHLWRKYGQKEILNAKYSRSYYRCTHKFDQRCQATKQVQRIQEKPPLYKTIYYGHHTCKNILNPDIILDPNSPSDTSILLSFNNTFPTPSKQDCPFVSSPPSQSENKECKEDVSSSSLLDDDYLLSHEPTTFDNLYSRHVTTLSSTLESDNRDLFSSFLCDSVVFDDVFQPFVQF 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi687g00012 296 SMART WRKY_cls 119 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi687g00012 296 Gene3D WRKY domain 104 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi687g00012 296 MobiDBLite consensus disorder prediction 67 93 - -
Sebi687g00012 296 Pfam WRKY DNA -binding domain 120 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi687g00012 296 MobiDBLite consensus disorder prediction 70 86 - -
Sebi687g00012 296 ProSiteProfiles WRKY domain profile. 120 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi687g00012 296 SUPERFAMILY WRKY DNA-binding domain 115 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi687g00012 296 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 11 213 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi687g00012 Sebi-Chr687 314113 316038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi687g00012 7 179 WRKY Transcription Factor Family AT3G56400 38.202 5.96e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi687g00012 WRKY 2.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi687g00012 - - gmx:100805895 296.204