Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi686g00019 ATGGAGCGTCCTTCAGCTGGTGGTGGAGCTCATAAATTTAGGCACGTCGTTAAAGGCAGTCATGGGGATCATATTAGGATTCCTGGCGAGATCTACAGTAAGATTTGGGGAGATTCTGATAAGCCGGTTCACGTTGTGGACCCATTTACCAAGGGTGTGTTTAAATTTTATATTCTTTCAACCAAAATTGGAAAATTCATGTATGAGGCAATACCTGGGTTGAGTGAACACTATGGACCACTGGTCGGGAAGACAATTGAATTCACCCATGCCCGTGGCTTCAAATTTTTGCTGAATATGATGGATGATGGTATGGGTGAAAATAGGCATGAACTCCTGAGTGACGTTCAAAAAGGGTCTGGTAGGTGTGGGGCAGTCATTCACGTTAGTTCTGACTCAAGTGATAATGAAGCTGAGGGTGATGGAGTAGAAGCAATCCAGGGAGGTGGACATCTTGAGGTTGTCATACGGGTCGAACGAGAGAGTGGGGATAATTACGTGGGCGGAGGTGTGAGGGGCTGGAGTGGGAGGTACCGCTTTGAGAAAACTATCACAAGGGCACAATCACGCGGAAGACAGTCACTGCCACTTCCGCGGGTTTTTGTGAAGAAATTTCTGCAACCTGACTGGGAGGTGTTTGACATTCATCCGTATCGGTCAAGAAAGTACATATGCAACTTGTTGTGGAGGCAAAGAAAGGGCAATAATGATTGTCATCTGGGGAGGAGCTGGTACCAGTTTGTGAAGGACAACCGGTTGAAGTTTGGGGACATCGTTCTTTTCGAGACTGTTCGTGAAAATTTCAACTATGCACAAGTTACTATTGTTAGGCGAGGGGAGCATTTGAATGAGAGATAG 858 0.4604 MERPSAGGGAHKFRHVVKGSHGDHIRIPGEIYSKIWGDSDKPVHVVDPFTKGVFKFYILSTKIGKFMYEAIPGLSEHYGPLVGKTIEFTHARGFKFLLNMMDDGMGENRHELLSDVQKGSGRCGAVIHVSSDSSDNEAEGDGVEAIQGGGHLEVVIRVERESGDNYVGGGVRGWSGRYRFEKTITRAQSRGRQSLPLPRVFVKKFLQPDWEVFDIHPYRSRKYICNLLWRQRKGNNDCHLGRSWYQFVKDNRLKFGDIVLFETVRENFNYAQVTIVRRGEHLNER 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi686g00019 285 Gene3D - 175 281 IPR015300 -
Sebi686g00019 285 Pfam B3 DNA binding domain 180 270 IPR003340 GO:0003677
Sebi686g00019 285 ProSiteProfiles B3 DNA-binding domain profile. 180 279 IPR003340 GO:0003677
Sebi686g00019 285 SMART B3_2 180 279 IPR003340 GO:0003677
Sebi686g00019 285 SUPERFAMILY DNA-binding pseudobarrel domain 176 277 IPR015300 -
Sebi686g00019 285 CDD B3_DNA 179 277 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi686g00019 Sebi-Chr686 377696 379596 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi686g00019 B3 5e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi686g00019 - K09287 lja:Lj0g3v0086279.1 93.5893