Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi686g00013 ATGGAAGGACGTCCACCAGCAAACGCCCTCCCTCCCCGATCGCCCTGGCTGACCATGGAATACCACCCTCAAATGATAACAACTCCACTGAATCCTCATTCCGAGAAGGCCTTGATTCCGAAGCTATTTGTAGATGATTACAGAATGAGCCTTCGACCAATAGTTCAGTTCAAGGACCCTGCCGGAAACATCGTTGACATTTCTGTTAAGGCGACACTTCAATTCTTGTACTTCACCGACGGGTGGAAGGAACTGAAAAATGTGTATCCCATCCCCAACGGCGGCTCTATTTTCCTCAAATACGAATCACCCTCCCTGTTTGTCATTTTCGTTCTTGACAGAACCTTGCATGAGATCACATACCCCACTCCACCCGCCAGATTCTTAAATGTCAAGACATGTATCCAGGACCTATTCCTTAACCAGCCCACTAGAGTTCCACATATTTTTCCCCGATTCGACCCAGACAGGACGACCTGCATCCTCACTTATAAGATTAAAATTTCTCATACTCAGTCAAGGGGGCGAAACATGACTTTGGATCCCCCCTTCACGACACACATTTTCTCCACTACGAGGGAACATCTCACAATGGTGGATGAGGAGGGCAACCAGTACCCAGTAGAGTTGGTCTGGGCCAGACCATACAGTGAGAAAGCCCTCTTCGTCACAGGATGGCAAGAATTCTGCCAAAGAAGGATGCTTTGCCCCAACAGCGTCGTTGAGTTTGGTGCACTATGGTTATCACAGCTCAGTTTGTGCTAA 765 0.481 MEGRPPANALPPRSPWLTMEYHPQMITTPLNPHSEKALIPKLFVDDYRMSLRPIVQFKDPAGNIVDISVKATLQFLYFTDGWKELKNVYPIPNGGSIFLKYESPSLFVIFVLDRTLHEITYPTPPARFLNVKTCIQDLFLNQPTRVPHIFPRFDPDRTTCILTYKIKISHTQSRGRNMTLDPPFTTHIFSTTREHLTMVDEEGNQYPVELVWARPYSEKALFVTGWQEFCQRRMLCPNSVVEFGALWLSQLSLC 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi686g00013 254 Gene3D - 164 249 IPR015300 -
Sebi686g00013 254 SUPERFAMILY DNA-binding pseudobarrel domain 164 250 IPR015300 -
Sebi686g00013 254 Pfam B3 DNA binding domain 165 244 IPR003340 GO:0003677
Sebi686g00013 254 SUPERFAMILY DNA-binding pseudobarrel domain 27 114 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi686g00013 Sebi-Chr686 350146 351164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi686g00013 35 121 B3 DNA Binding Superfamily AT3G18990 28.409 3.46e-07 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi686g00013 B3 1.3e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi686g00013 - K27088 mtr:25480725 65.4698