Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi686g00009 ATGAGGGCATTTTACCATGTTCATTACCCAGTACACATGTGGTACAAGTATCATGGAAATGCAACATTCAGTTTTGAACTTTGGCCAATTGATGGACATCAGCAGATTGAATATCCAAATAATGCTTTGAATAATGATCATCATCATGTTAGTAGCAACCACTCAAGGACAGGGGAGAACATGGTTAACGAAGATGTTGAAGGGGAAGATGTTCAAGGAGAAGCAGATCAAATAATGGGAGTAAAAGGTGAAGATCTATGGATGACAACAGTCACTCAGGCACAATCGGAGGGCAGGCGTGGAGTGATAATACCAGCCAGGGTTGTGACCACTTACTTCCACAACAGGCCACACCAATTTCAGGTAAGATTACCAAATGGCCAAGTCAAAACGTGGGAAATAGTTTGGAGTCAGCGAATTCCAAGTGAATGTAAAATTGGACATGGATGGAGTGAATTTTGTACAACCCATAGGCTGCGCAAAGGTGACCGGGTCAGGTTTTGGAAATTGGATGGTGAAGCTTCCATCAGAATCGTTCTTACAAGATCATCATCTTAA 558 0.4211 MRAFYHVHYPVHMWYKYHGNATFSFELWPIDGHQQIEYPNNALNNDHHHVSSNHSRTGENMVNEDVEGEDVQGEADQIMGVKGEDLWMTTVTQAQSEGRRGVIIPARVVTTYFHNRPHQFQVRLPNGQVKTWEIVWSQRIPSECKIGHGWSEFCTTHRLRKGDRVRFWKLDGEASIRIVLTRSSS 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi686g00009 185 Gene3D - 67 183 IPR015300 -
Sebi686g00009 185 CDD B3_DNA 103 182 IPR003340 GO:0003677
Sebi686g00009 185 ProSiteProfiles B3 DNA-binding domain profile. 87 184 IPR003340 GO:0003677
Sebi686g00009 185 Pfam B3 DNA binding domain 88 172 IPR003340 GO:0003677
Sebi686g00009 185 SUPERFAMILY DNA-binding pseudobarrel domain 90 171 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi686g00009 Sebi-Chr686 280610 281288 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi686g00009 B3 7.7e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi686g00009 - K11290 vun:114180428 45.0542