Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi686g00007 ATGGAATTTAACAAGGACTTTATGGATGGTTGTTCTACATTTTGGACTGATGAAAATTCTGAGAGCAACCGAGATGAGTCACCTAATGGGGATGGAAACCCGGTGGGAGACCAAGCTGGGCTGTCATGGGGCGAGAGGATGATACATGAACTAACACATGATGAAATTAGACGTCTGGAGTTCGTGTGTAATAAGGAGGGAACAAGGGACAAGAAACACTTGCAGAGAAAGGACAGAGTGAGGGAGGCCAGGGCAATTACTCGTGTGCAGTGCACAGCAAGGATGCGTGTTTACTTAGATATGAGGAGTGGGAAATGGAAGGTGTCTGCATTCGACGACGATCATAACCATGAGTTAACTCCTCCAACATATGTTCACATGATGTCGGCTTATAGACGATTGAGTGAATCTGATAAAGCTCAAGTTGATACCCTGCATGCAGCGGGTGTGAGAACTTGCCATATTATGAGTTTTATGATTGGACAGAAAGGGGGACATGGTGAATTAGGTTTCTGTAAAAAGGTCATGTATAACCACATTGATAAACAGAAGAGGGCTAATATAGAGGATGGTGATGCATTTGCAGCGCTGTGTTATTTGCAGGGAAAGTATAACAGTGATCCACTAATGCATTGCATGTTCAGGACAACAGACGATGGCAGACTGCAGGACCTATTTTGGTGTGACGGTGCAAGTCGTGTTGATTATCAGTGTTTTGGAGATGTAATAGCATTTGACACGACTTATAAGAAGAACAAATATAACAAGCCTTTGTGGGTTCTCGAGACGTTTTTGGAAGCAATGTTTGGCAAAGAGCCCAGTGTCGTAGTCACCGATGGAGATGCAGCCATGCGAGAAGCTATCAGGGTTGAATTCAAGCGCATGATTTATGGCAAATTCACGGAGGATAGATTTGAACGGGAGTGGAAAAACATGGTTGATAAATTTGGATTATCTAACAACAGGTGGGTCCAGAAAATGTATGACATGAAGAGGTTATGGGCAAATTCATATATGGGAGACACATTTTATGGTGGTATTAGAACAACGTCTGTGTGTGAGGGGATTAATTCGTTCATTAAGAGGTATGTCCAAAATAGGAACAGCCTGGTGGACTTCCTTCACAACTTTGACAGGGCGTTAAAGGAGTACAGGCACAATGAATTGATGTCTGATTTTAAGTCGTTTTATGGAGAACATGTATTGACGACAACTCTTTTTACCATTGAGGAATGTGCCTCCAAAGTGTTCACTAGGAAAAAGTTTTGGGAAGTAAAGTCCGAGATTGAGATTGCGGCTGCCTACAATGTAGTGGATAGGGCTGAGACTGGTGAGAGTGTGAGGTTGACAATGAATAAATTTGGCAAACTGGATTATGAGTATCATGTTGTATTAGATAAAAGTGAATTGAAGTTCATTTGTGAGTGTAGAATGTTTGAGTCATGTGGCATTCCCTGCCGTCACATTTTTTGTGCAATGAAGAATGAACACGTGAAAACCATTCCAAGTAGCCTAATACTGAAGCGGTGGACGAAATCAGCAAAGACTGATTTCATGTCCAGTGACCCCGTTGTGAGGTTAGATAAGGATAAGGTTGACTTGCTAAGGGAGGGAGGTATAGGTGCTGCATGTGACTATTTATCCCGTGTTGCTAAGAAACATGTGCATGATTACAAGTCCATTATGGATGACATATATAAAGTCGCTGAGAAAATTGAGAGTCGTAATTGCCAGAGTGAAAAGAAAAGTAATGGGCGGGGTCAAATTGGTGATCCAGAGGTGGTGAAGACTAAAGGCGCACCAAGGAAGAGCAGAAGGATGACGAGAGCCAGAAGGTGTTCGAACTGTAGAAGAAGAGGACACACGAAGAACAAATGTCCTGGGTTGAGTCAACGAGATGTTTTAGGGGAAGTTGAAGACAATGAATCTTCGCGGGGGAGTGATGGTGCCATGGGAAATGACAAAGGAGAAGTGATGATGGTTGTGTTTGATATACAGGGTGGATTAAGTTGGGGTGATGATTTAACTCTCAGTCAAAGAGGACCGACCGGTACAAGCAAAGGGAAGAGGCGGTGTGTGTCTCAACCATCCCAACCATCCTTCGATCGTGCTGAATTGCAGGGACTACATGACAATGTTGGTGAAAGACATGCCAAGCAAAGTAGGCGTTCAAATGGCAAGCAGGAAAATAAAGGAGTAGACGGAGCAGGAGACGAGATGATGTTTGGACCTGGGAACATGGGTCCAGGAGCGGGCGTTGTCAATGTTAATATGCTCCCAACTTCCCTTTTTCCTCATTTCCCGTCAACGAGCATATATCCCCCTCCCCCATGTCTGCGACCTCCACCCTACGGTCCCTTTTATGGATACGGCTATTGTGGCCAGCCTTAA 2391 0.4396 MEFNKDFMDGCSTFWTDENSESNRDESPNGDGNPVGDQAGLSWGERMIHELTHDEIRRLEFVCNKEGTRDKKHLQRKDRVREARAITRVQCTARMRVYLDMRSGKWKVSAFDDDHNHELTPPTYVHMMSAYRRLSESDKAQVDTLHAAGVRTCHIMSFMIGQKGGHGELGFCKKVMYNHIDKQKRANIEDGDAFAALCYLQGKYNSDPLMHCMFRTTDDGRLQDLFWCDGASRVDYQCFGDVIAFDTTYKKNKYNKPLWVLETFLEAMFGKEPSVVVTDGDAAMREAIRVEFKRMIYGKFTEDRFEREWKNMVDKFGLSNNRWVQKMYDMKRLWANSYMGDTFYGGIRTTSVCEGINSFIKRYVQNRNSLVDFLHNFDRALKEYRHNELMSDFKSFYGEHVLTTTLFTIEECASKVFTRKKFWEVKSEIEIAAAYNVVDRAETGESVRLTMNKFGKLDYEYHVVLDKSELKFICECRMFESCGIPCRHIFCAMKNEHVKTIPSSLILKRWTKSAKTDFMSSDPVVRLDKDKVDLLREGGIGAACDYLSRVAKKHVHDYKSIMDDIYKVAEKIESRNCQSEKKSNGRGQIGDPEVVKTKGAPRKSRRMTRARRCSNCRRRGHTKNKCPGLSQRDVLGEVEDNESSRGSDGAMGNDKGEVMMVVFDIQGGLSWGDDLTLSQRGPTGTSKGKRRCVSQPSQPSFDRAELQGLHDNVGERHAKQSRRSNGKQENKGVDGAGDEMMFGPGNMGPGAGVVNVNMLPTSLFPHFPSTSIYPPPPCLRPPPYGPFYGYGYCGQP 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi686g00007 796 MobiDBLite consensus disorder prediction 576 655 - -
Sebi686g00007 796 Pfam FAR1 DNA-binding domain 47 120 IPR004330 -
Sebi686g00007 796 MobiDBLite consensus disorder prediction 601 625 - -
Sebi686g00007 796 PANTHER OS01G0519700 PROTEIN 55 634 - -
Sebi686g00007 796 MobiDBLite consensus disorder prediction 672 702 - -
Sebi686g00007 796 ProSiteProfiles Zinc finger CCHC-type profile. 611 627 IPR001878 GO:0003676|GO:0008270
Sebi686g00007 796 MobiDBLite consensus disorder prediction 708 734 - -
Sebi686g00007 796 ProSiteProfiles Zinc finger SWIM-type profile. 459 497 IPR007527 GO:0008270
Sebi686g00007 796 SMART 26again6 472 499 IPR006564 GO:0008270
Sebi686g00007 796 MobiDBLite consensus disorder prediction 17 40 - -
Sebi686g00007 796 MobiDBLite consensus disorder prediction 671 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi686g00007 Sebi-Chr686 223081 225929 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi686g00007 FAR1 6.3e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi686g00007 - - vvo:131629359 627.861