Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi685g00021 ATGGTTAAGTGGTTGAAGATTAAGGTCATTGGAAGTGGCAGCTATGGCACCGTTTACGAAGCTATCAATTCTTCACCAGAAAAAGATTCTCTAAAGTCAATAGCTATAAAGAGTGCACCACTTAGCAAGCCCTATGAATTGCATAGAGAAGGGCAGATTCTAAACTCTTTCCTTTGTGCTCCAGAAATTGTTCAATCCCACGGCAGTAATGTCACCATGGAGGATGGCAAGTGGGTCTACAATCTCCACTTGGAGTATGCCCCTTTTGGCACTCTTACCGACATGATCAAGAAAGGGCGTTTCTTGGAGAGCAGGACAACAAAAGTCTACATGAACATGCTCCTACAAGGACTTTCTCGCATCCACAAAAAGGATTTATATTATCAACTGAAAATTGCTGACTTTGGATTGGCTAAGACTCCTGAGGAGAAGGTGAACCAAGAAGATTGGAAGTGGAGGTGTAGAGGGACTCCTTTGTTCATGTCACCCGAATCAATTTCATGTGGCCAAATTGAAGCACCTTTGGACATATGGTCTTTTGGGTGCATAGTTCTTGAGATGCTCACTGGATACCCTGCATGGAGGGATGAGATGAAAACTGAAGAGGACGTAATGCTTAAGGTTGGCATTATGAAAAAAGCACCAGAGATTCCACTTGGACTGAGTGATGGATGCATTGACTTTTTAAACAAGTGTTTTGCACTAGACCCAAGTCAAAGATGGACCGCTGAAAAGCTTATGTATCATCATTATCTTCTTTTGGATTTGGATTAG 774 0.4225 MVKWLKIKVIGSGSYGTVYEAINSSPEKDSLKSIAIKSAPLSKPYELHREGQILNSFLCAPEIVQSHGSNVTMEDGKWVYNLHLEYAPFGTLTDMIKKGRFLESRTTKVYMNMLLQGLSRIHKKDLYYQLKIADFGLAKTPEEKVNQEDWKWRCRGTPLFMSPESISCGQIEAPLDIWSFGCIVLEMLTGYPAWRDEMKTEEDVMLKVGIMKKAPEIPLGLSDGCIDFLNKCFALDPSQRWTAEKLMYHHYLLLDLD 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi685g00021 257 Gene3D Transferase(Phosphotransferase) domain 1 94 255 - -
Sebi685g00021 257 ProSitePatterns Protein kinases ATP-binding region signature. 10 37 IPR017441 GO:0005524
Sebi685g00021 257 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 252 - -
Sebi685g00021 257 Gene3D Phosphorylase Kinase; domain 1 1 93 - -
Sebi685g00021 257 ProSiteProfiles Protein kinase domain profile. 4 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi685g00021 257 Pfam Protein kinase domain 6 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi685g00021 257 SUPERFAMILY Protein kinase-like (PK-like) 4 252 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi685g00021 Sebi-Chr685 271000 271838 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi685g00021 2 257 MAP Kinase Kinase Kinase AT3G50310 34.066 8.78e-50 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Sebi685g00021 Pkinase 4.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi685g00021 - - qsa:O6P43_026965 257.299