Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi685g00020 ATGGTTAAGTGGTTGAAGATTAAGGTCATTGGAAGTGGCAGCTATGGCACCGTTTACGAAGCTATCAATTCTTCACCAGAAAAAGATTCTCTAAAGTCAATAGCTATAAAGAGTGCACCACTTAGCAAGTCCTATGAATTGCATAGAGAATGGCAGATTCTAAACTCTTTCCTTTGTGCTCCAGAAATTGTTCAATCCCACGGCAGCAGCAATGTCACTATGGAGGATGGCAAGTGGGTCTACAATCTCCACTTGGAGTATGCCCCTTTTGGCACTCTTACCGACATGATCAAGAAAGGGCGTTTCTTGGAGAGCAGGACAACAAAAGTCTACATGAACATGCTCCTACAAGGACTTTCTCGCATCCACAAAAAAGGATTTGTGCATTGTGATCTCAAACCTGATAACATCCTTACTCCTGAGGAGAAGGTGAACCAAGAAGATTGGAAGTGGAGGTGTAGAGGGACTCCTTTGTTCATGTCACCCGAATCAATTTCATGTGGCCAAATTGAAGCACCTTTGGACATATGGTCTTTTGGGTGCATAGTTCTTGAGATGCTCACCGGATACCCTGCATGGAGGGATGGGATGAAAACTGAAGAGGACGTAATGCTTAGACTTGAATGCGCAAATGGCGTTGTGGAGAAGACCTACTGGTGCTGGTGTTGTTATCGCCTTGTTGCTGTTTTGTGGTTTTTCTATTCAACTTGGCTTCGGCCTCGTCAGGTGGGCGTCATGGGAGGGAGTTTCTTCCAGAATTCAGATTCTTCCGATTCATTCACGAGTGATGACTCAGAGCGTGTAAGGGAGCTGCATAAATCCCCTTCCCCTGATGCTGACCTTGAAAGGGGAAATCACGACGCCAATGGAAACACAATTACTGTGCTCAAGCTTCAGGTTGCAATGTTTGGTGGTATGGGAAGCTCAATACAAAGGGATCTGACTAGGATTGCAGAAGCAGCAGATACATCCTCTCCGGAAGGTGTGAGCAATCTCTTGACAGAGACAATACTGACTTTGGATCGGCATCCTGGATACTGTATTGCAGGATATTCATCTGTGGATTTGAAGCGGAGTAAAGAAGATGGGGGAGAAATGCTATAA 1104 0.452 MVKWLKIKVIGSGSYGTVYEAINSSPEKDSLKSIAIKSAPLSKSYELHREWQILNSFLCAPEIVQSHGSSNVTMEDGKWVYNLHLEYAPFGTLTDMIKKGRFLESRTTKVYMNMLLQGLSRIHKKGFVHCDLKPDNILTPEEKVNQEDWKWRCRGTPLFMSPESISCGQIEAPLDIWSFGCIVLEMLTGYPAWRDGMKTEEDVMLRLECANGVVEKTYWCWCCYRLVAVLWFFYSTWLRPRQVGVMGGSFFQNSDSSDSFTSDDSERVRELHKSPSPDADLERGNHDANGNTITVLKLQVAMFGGMGSSIQRDLTRIAEAADTSSPEGVSNLLTETILTLDRHPGYCIAGYSSVDLKRSKEDGGEML 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi685g00020 367 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 208 - -
Sebi685g00020 367 ProSitePatterns Protein kinases ATP-binding region signature. 10 37 IPR017441 GO:0005524
Sebi685g00020 367 SUPERFAMILY Protein kinase-like (PK-like) 4 234 IPR011009 -
Sebi685g00020 367 ProSiteProfiles Protein kinase domain profile. 4 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi685g00020 367 Pfam Protein kinase domain 6 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi685g00020 367 MobiDBLite consensus disorder prediction 254 287 - -
Sebi685g00020 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Sebi685g00020 367 MobiDBLite consensus disorder prediction 260 285 - -
Sebi685g00020 367 Gene3D Transferase(Phosphotransferase) domain 1 1 218 - -
Sebi685g00020 367 SMART serkin_6 4 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi685g00020 367 Pfam Protein of unknown function (DUF1517) 293 360 IPR010903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi685g00020 Sebi-Chr685 264529 267392 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi685g00020 2 193 MAP Kinase Kinase Kinase AT4G36950 36.585 1.82e-34 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Sebi685g00020 Pkinase 5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi685g00020 - - qsa:O6P43_026965 212.616