Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi682g00006 ATGGAGGATCATAGAATGGCAATTGAGGAGCTTGTGAGAGGACGTGAGTTTGCTAATCAGCTTCGACAAGTCATCAGTGGTGATGATGAGTCAACAATAGGAACTCCATTTGCTCAACATCTTGTGAAGAACGTGCTCAGATCCTTCACCAACACCATCTTCCTTTTGGACAAATCGCATGAGGTTTCTCATCAGATGCAAAAAAGGGACTCTTCCTTGATTAGTACTCCTGCTAAATCTGAAGACTCTCAAGAAAGTTGTAGGAGTTCCACCGATAAGTGCAGAAGAGGGTGTTACAAGAGAAGAAAAACTACACAAACATATTGGGAGAAGGTGTCAGAAATTCCAGAAGATGATGGCCATGTATGGAGAAAATATGGCCAAAAGGAAATCCTTAATGCCAAATACTCAAGGAGCTACTACAGGTGCACTCACAAGTTTGATCAGAGATGCCAAGCAACAAAACAAGTGCAGAGAATTCAAGAGAAGCCTCCATTGTATAAGACTATCTATTATGGCCAGCACACTTGCAAAAACACCTTAAACCCTGACATCATACTTGATCCCAATTCTCCTTCTGACACTTCCATTTTGCTTAGTTTTAACAACACCTTCCCAACTCCAACTCCAACCAAACAAGACTGCCCCTTTGTATCATCATCTCCTCCCTCACAATCAGAGAACAAGGAATGTAAGGAGGATGTTTCCTCATCTTCCTTATTGGATGATCAATATTACCTGCTCTCCCCTGAGCCAACTACTTTTGATAATTTGACAAGGCATGTCACTCTATCATCGACCCTTGAATCCGATAACAGGGATCTGTTTTCTAGTTTCTTGTGTGATTCTGTTGTGTTTGATGATGTTTTTCAGCCTTTTGTTCAATTTTGA 891 0.4108 MEDHRMAIEELVRGREFANQLRQVISGDDESTIGTPFAQHLVKNVLRSFTNTIFLLDKSHEVSHQMQKRDSSLISTPAKSEDSQESCRSSTDKCRRGCYKRRKTTQTYWEKVSEIPEDDGHVWRKYGQKEILNAKYSRSYYRCTHKFDQRCQATKQVQRIQEKPPLYKTIYYGQHTCKNTLNPDIILDPNSPSDTSILLSFNNTFPTPTPTKQDCPFVSSSPPSQSENKECKEDVSSSSLLDDQYYLLSPEPTTFDNLTRHVTLSSTLESDNRDLFSSFLCDSVVFDDVFQPFVQF 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi682g00006 296 Gene3D WRKY domain 101 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi682g00006 296 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 213 IPR044810 GO:0003700
Sebi682g00006 296 SMART WRKY_cls 117 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi682g00006 296 Pfam WRKY DNA -binding domain 118 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi682g00006 296 SUPERFAMILY WRKY DNA-binding domain 113 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi682g00006 296 MobiDBLite consensus disorder prediction 209 231 - -
Sebi682g00006 296 MobiDBLite consensus disorder prediction 209 226 - -
Sebi682g00006 296 ProSiteProfiles WRKY domain profile. 118 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi682g00006 296 MobiDBLite consensus disorder prediction 68 84 - -
Sebi682g00006 296 MobiDBLite consensus disorder prediction 66 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi682g00006 Sebi-Chr682 153973 155838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi682g00006 7 177 WRKY Transcription Factor Family AT3G56400 38.983 6.55e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi682g00006 WRKY 1.9e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi682g00006 - - gmx:100805895 288.5