Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi681g00014 ATGGTAGCTTCAAACACTGCCATAGTGAGCTGCACATTAGAAGAGTTAATGGACATTGAGAAGAATGTGCAAGAGAACAGGGCTTTGTGGGTGTTGAATCCTCCTGAGCCACCATGCATGCTACGTCAGTTCTTTGACAACATCAAGGGTACCCTCTTTCCGCGTCCAAACCGAAACAGATTCTTTACACTCAGGAATCAATCTACGCCCAAACGTGTGTACGCCTTGTTGAAGGCCTTGTTTCCCATCCTTGCTTCATTCCAAAATTACAATGCACATAAGTTCAAGTGTGATTTCTTGGCTGGTCTAACCCTCGCAATCTTTGCCATTCCCCAGTCTATGGGAAATGCGACTTTGGCACAACTAAGTCCTGAATATGGCCTCTATACAGGTATTGTCCCACCTCTTATTTATGCATTGCTGGCGAGTTCAAGGGAGATAGTGATTGGACCTGCAACTGTGGATTCACTGCTTATTTCCTCAATGATTGGGAAATTGAAAGATCCAATTCATGATCCTATTAGTTACACTCAGCTCGTTTTCACTGCAACTTTTTTTACGGGTATCTTTCAAGTTGCTTTCGGACTCTTCAGGTTTGGGTTTTTGGTGGATTATCTTTCCCATGCCACCATCGTGGGGTTCTTGGCAGCAGTTGCCGTCGGCATTGGATTACAACAATTGAAAGGATTATTTGGGATTGTTAAGTTCACCAACAAATGTAATTTAATTTCCGTCATGAAAGCTGTTTTCACATCCATAAAAGACCAACAAGTGTGGCATCCTTGCAATTTCATCATTGGATTCTCATTTCTGTTTGTCATCTTATTTACAAGATTCCTGGGGAGAAGGAAAAGGAAACTGTGCTGGTTGTCACACATTGCTCCTCTCCTTTCAGTTATTGTATCCTCTGTTATTGCATATAGAATAAATGTTCATGAGGTTGAAGTGAAGGACTATAGAGTTGAAGTCTTGGGACCAATCAAAGGAAGTAGCTTCAACCCAAGCTCACTCTACCAGTTACAATTTGATGGTAAATTTGTGGGTCCTTTGATCAAAATAGGGTTGACCATTGCTGTTATTTCAACCACGGAAGCTATTCTTATTGGTCGATTATTTGCGTCCCTAAGAGGATACAATATTGATGCAAACAGAGAAGTGTTATCACTTGGCATAATGAACATTATTGGATCCTTCACTTCTTGCTACGTTGCATCAGGTTCTATAACACGTACTACTGTAAATTATAATGCTGGGTCTGAAACAATGGTGTCGAACATAGTGATGGCACTAACGGTGCTGTTGTCATTTAAATGTTTGAGTGGGTTCTTATATTTTACTCCAAAAGCAGTCCTAGCAGCAATAATCCTTTCGGCAGTACCAGGACTGATTGACCTTAACAGAGCATATAGAATTTGGAAGGTTGACAAGCTAGATTTCCTTGCTTGCGCAGGAGCCTTCTTCGGAGTGTTGTTTGCATCTGTGGAAATGGGCCTTGTAATTGGGATCACAATATCATTCGCAAAGATAATTCTGATCTCAATTCAACCTGGTATAGAGGTTGTTGGAAAGCTTCCTGGAACAAATGCATTTGGTGATGTTGAACAATATCCAATGGCAGTCAAAATTCCTGGAGTTTTAATAGTCTCTGTAAAATCTGCTTGGCTCTGTTTTGCAAATGCATTTCTTGTCAAACAAAGGATTGAGAGATGGGTGACTGATGATCAAGAAGCTGAACATGGCAAAGAAGAAAACACCTTCAAAATCGTCATTCTTGATACATCAAGTCTTATGAATATTGACACCGCGGGAATAGCTTCTTTGGTGGAGCTGAATAAGAATCTGACATCACATGGAGTGAGGTTAGCCATCGCTAACCCAAGGTGGCAAGTAATTCACAAGCTAAGATTAGCTAACTTTGTAAGCGAAATTGGAGGAAGGGTTTTCCTGTCTGTGGCAGAAGCTGTAGATGGAATGCTAGGTGCTAAAATGGCTACTGTATAA 2001 0.4098 MVASNTAIVSCTLEELMDIEKNVQENRALWVLNPPEPPCMLRQFFDNIKGTLFPRPNRNRFFTLRNQSTPKRVYALLKALFPILASFQNYNAHKFKCDFLAGLTLAIFAIPQSMGNATLAQLSPEYGLYTGIVPPLIYALLASSREIVIGPATVDSLLISSMIGKLKDPIHDPISYTQLVFTATFFTGIFQVAFGLFRFGFLVDYLSHATIVGFLAAVAVGIGLQQLKGLFGIVKFTNKCNLISVMKAVFTSIKDQQVWHPCNFIIGFSFLFVILFTRFLGRRKRKLCWLSHIAPLLSVIVSSVIAYRINVHEVEVKDYRVEVLGPIKGSSFNPSSLYQLQFDGKFVGPLIKIGLTIAVISTTEAILIGRLFASLRGYNIDANREVLSLGIMNIIGSFTSCYVASGSITRTTVNYNAGSETMVSNIVMALTVLLSFKCLSGFLYFTPKAVLAAIILSAVPGLIDLNRAYRIWKVDKLDFLACAGAFFGVLFASVEMGLVIGITISFAKIILISIQPGIEVVGKLPGTNAFGDVEQYPMAVKIPGVLIVSVKSAWLCFANAFLVKQRIERWVTDDQEAEHGKEENTFKIVILDTSSLMNIDTAGIASLVELNKNLTSHGVRLAIANPRWQVIHKLRLANFVSEIGGRVFLSVAEAVDGMLGAKMATV 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi681g00014 666 ProSiteProfiles STAS domain profile. 555 658 IPR002645 -
Sebi681g00014 666 SUPERFAMILY SpoIIaa-like 540 656 IPR036513 -
Sebi681g00014 666 CDD STAS_SulP_like_sulfate_transporter 536 649 - -
Sebi681g00014 666 Pfam STAS domain 536 654 IPR002645 -
Sebi681g00014 666 NCBIfam sulfate permease 82 653 IPR001902 GO:0016020|GO:0055085
Sebi681g00014 666 Gene3D STAS domain 515 660 IPR036513 -
Sebi681g00014 666 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Sebi681g00014 666 FunFam Sulfate transporter 31 515 660 - -
Sebi681g00014 666 PANTHER SULFATE TRANSPORTER 53 656 IPR001902 GO:0016020|GO:0055085
Sebi681g00014 666 Pfam Sulfate permease family 95 483 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi681g00014 Sebi-Chr681 391757 398768 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi681g00014 24 663 Inorganic Solute Cotransporters AT5G10180 54.206 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi681g00014 K17469 - gmx:100817841 952.97