Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi681g00012 ATGGCTTCTTCAGCAGTGGAGACCTGCAAATTGGAAGATATGCAGGTGGACATTGAGAAGAACGTAAGGTCCCAGTGGGTGCTTAACGCTCCTGAGCCCCCAAGTCCCTGGGAAGTGGTTGTAGATTCTGTGAAGAAAACCTTCTCGCAGTGTCGAGAAAAGTTTTCCTCTCTCATAGATCAACCCTGCACCACACTTGTGCTTTCCATTCTACAGGGGATTTTTCCCATTCTTTCATGGGGCAGAAACTACACTGCAGCCAAATTCAGGAAAGATTTTCTCGCAGGCCTCACTATTGCAAGTCTCTGTATTCCCCAGAGTATTGGGTATGCGACTTTGGCGCACCTTGACCCTCAATATGGCCTTTATACGAGTGTTGTACCACCGCTTATCTATGCTGTAATGGGAACTTCGAGAGAGATAGCAATTGGTCCTGTGGCTGTGGTTTCGCTGCTGTTATCCTCCATGATTCAGAAATTAGTAGACCCTGTTCATGATCCAGTCGGTTATACAAAGATGGTTTTTCTTGCTACTCTCTTTGCTGGTATCTTTCAGACTTCCTTCGGACTCTTCAGGCTGGGGTTCCTTGTGGATTTTCTATCGCATGCTGCAATAGTTGGATTTGTGGGAGGAGCAGCGATAGTGATTGGACTTCAACAGTTGAAGGGACTGTTAGGGATCACTCATTTTACGACCAAAACGGACATAATCTCTGTCATCAAAGCTGTCTGGGAAGCAATTCATAATCCTTGGAACCCTCGTAATTTTATCCTCGGATGCTCATTCTTGGTCTTCATCCTAGCCTCTAGGTTTCTGGGTAAAAAGAAGAAGAAGCTGTTCTGGTTGGCATCAATCTCTCCTCTTGTAACTGTTATACTATCAACTCTCTTTGTTTTTCTGACACGGGCTGATAAAAATGGAGTTAAAATTGTGAAACACGTCAAAGGGGGACTCAATCCAATCTCCATCCATCAGTTAGATTTCAACAATCCCTATGTTGGAGAAGTCGCCAAAATTGGATTGGTCATTGCTGTTGTTGCCCTTACTGAATCTGTTGCTGTTGGACGATCTTTTGCATCCATCAAAGGATACCAACTTGATGGAAACAAGGAGATGATGTCAATTGGCTTCACAAACATTATAGGATCTCTCACCTCCTGCTATGTTGCAACTGGTTCATTCTCCCGGACTGCAGTGAATTATGCGGCTGGGTGTGAAAGTTTAATATCAAACATTGTGATGGCTGTGACGGTTTTGATATCACTGCTGTTTTTGACAAAGCTTTTGTATTATACACCAACTGCAATTCTCGCTTCAGTGATCCTCTCTGCACTACCAGGACTCATAGACTTCCCTGAAGCATTCAAAATTTGGAAGGTTGATAAGCTTGACTTTCTTGCTACCGCTGGAGCCTTCTTTGGGGTACTCTTTGCATCTGTTGAGATTGGTCTTCTAGTAGCGGTGGTAATATCATTTTCAAAGATCATTCTCATCTCAATTCGACCTGGCACAGAAACTCTTGGGAAACTTCCTGGAACTGATTTGTTCTGTGATGTCTATCAGTATCCTATGGCGGTTAAGATTCCTGGGGTTATGATAATACGTCTCAAGTCTGCGTTGCTTTGCTTTGCAAATGCCAATTTCGTTAGAGAAAGTATCATCAAATGGGTCACTCAGGAAGAATCACAAGATGACAAGGGAAATTCAAGAAGCACCACTCAACTCGTAATTCTTGACACCTCGAATTTGGTGAACATTGACACATCCGGAATTGCTTCTCTAGAGGAACTGCACAAGAGTTTGTCTTCACATGGGAAACAGTTAGCCATTGTCAACCCTAGGTGGCAAGTGATTCACAAGCTAAAGGTGTCAAACTTTGTCAACAAAATAGGTGGTAGAGTCTTTCTTACTGTTGAAGAAGCTGTTGGCTGCAAGAGTGAGTTCTAA 1947 0.4335 MASSAVETCKLEDMQVDIEKNVRSQWVLNAPEPPSPWEVVVDSVKKTFSQCREKFSSLIDQPCTTLVLSILQGIFPILSWGRNYTAAKFRKDFLAGLTIASLCIPQSIGYATLAHLDPQYGLYTSVVPPLIYAVMGTSREIAIGPVAVVSLLLSSMIQKLVDPVHDPVGYTKMVFLATLFAGIFQTSFGLFRLGFLVDFLSHAAIVGFVGGAAIVIGLQQLKGLLGITHFTTKTDIISVIKAVWEAIHNPWNPRNFILGCSFLVFILASRFLGKKKKKLFWLASISPLVTVILSTLFVFLTRADKNGVKIVKHVKGGLNPISIHQLDFNNPYVGEVAKIGLVIAVVALTESVAVGRSFASIKGYQLDGNKEMMSIGFTNIIGSLTSCYVATGSFSRTAVNYAAGCESLISNIVMAVTVLISLLFLTKLLYYTPTAILASVILSALPGLIDFPEAFKIWKVDKLDFLATAGAFFGVLFASVEIGLLVAVVISFSKIILISIRPGTETLGKLPGTDLFCDVYQYPMAVKIPGVMIIRLKSALLCFANANFVRESIIKWVTQEESQDDKGNSRSTTQLVILDTSNLVNIDTSGIASLEELHKSLSSHGKQLAIVNPRWQVIHKLKVSNFVNKIGGRVFLTVEEAVGCKSEF 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi681g00012 648 Pfam Sulfate permease family 89 468 IPR011547 GO:0016020
Sebi681g00012 648 Pfam STAS domain 522 641 IPR002645 -
Sebi681g00012 648 ProSitePatterns SLC26A transporters signature. 118 139 IPR018045 GO:0008271|GO:0008272
Sebi681g00012 648 NCBIfam sulfate permease 76 638 IPR001902 GO:0016020|GO:0055085
Sebi681g00012 648 Gene3D STAS domain 501 646 IPR036513 -
Sebi681g00012 648 ProSiteProfiles STAS domain profile. 541 645 IPR002645 -
Sebi681g00012 648 CDD STAS_SulP_like_sulfate_transporter 522 636 - -
Sebi681g00012 648 PANTHER SULFATE TRANSPORTER 54 643 IPR001902 GO:0016020|GO:0055085
Sebi681g00012 648 FunFam Sulfate transporter 31 501 647 - -
Sebi681g00012 648 SUPERFAMILY SpoIIaa-like 526 642 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi681g00012 Sebi-Chr681 343863 352638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi681g00012 15 642 Inorganic Solute Cotransporters AT5G10180 68.362 0.0 889
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi681g00012 K17469 - gmx:100817831 1115.52