Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi680g00008 ATGGCAGCAGCTTCAATTCCAACTTCAACAATACCATCTCATGTAAAAGCTTGGGTCTATTCTGAACACGGGAAGCCAAAAGATGTTCTGAAGTTCGATACTAATTTGCCTCTTACTGAAGTCAAACTAGATCAGGTACTAATCAAGGTTATTGCTGCTGCCATTAATCCCATAGATTTTGCAAAGATTCAAGGACATTACAAGGAGAGTGACTCTCCTTTTCCAATTGTTCCAGGCTATGACGTTGCTGGTGTGGTGGTCAAAGTAGGAACTGAAGTAAAGAAATTTAAGGAAGGGGATGAAGTTTATGGTATTGTTGAGGGAAAAGATGTTGGGTCTTTGGCCGAGTATACAACTGCTGAAGAGAAAGGTTTGGCTTACAAGCCACCTAATTTGAGCTTTGCTGAAGCTGCTAGCCTTCCTTTAGCAATTGAGACTGCTTATGGAAGCCTTGAGAAAATTGGGCTTTCAGCTGGTCAATCTATCCTTGTTTTAGGAGGTGGTGGTGGTGTCGGCACACTTGTTGTTCAGATTGCCAAACAAGTTTTTGGTGCTTCTAAGGTGGCAGCTACTGCCAGCACTGGAAAACTGGAATTGTTGAGGAAGGTGGGAGCTGACTTGGCTATTGATTACACAAAGGAGAATTTTGAAGACCTGCCTGAAAAGTTTGATGTAGTTTATGTTGGAGCCGGACAGACTGACAACAGGGCATTCAAGGCTGTCAAAGAAGCTGGCAAAGTAGTGACAATAATACCTCCTGGAGTTCCACCCGCTATCTTGTTCATACTCACTTCTGATAGGGCTTTCTTAGACAAATTAGGACCTTATTTGGAGAGTGGCAAGTTGAAGCCAATACTTGACCCCAAGAGTCCATTTCCATTTTCTCAGACTGTTGAAGCAATTTCCTATCTGGAAACAGGCAGAGCTGCTGGAAAAGTAGTCATTCATCCCATTCCATAA 960 0.4281 MAAASIPTSTIPSHVKAWVYSEHGKPKDVLKFDTNLPLTEVKLDQVLIKVIAAAINPIDFAKIQGHYKESDSPFPIVPGYDVAGVVVKVGTEVKKFKEGDEVYGIVEGKDVGSLAEYTTAEEKGLAYKPPNLSFAEAASLPLAIETAYGSLEKIGLSAGQSILVLGGGGGVGTLVVQIAKQVFGASKVAATASTGKLELLRKVGADLAIDYTKENFEDLPEKFDVVYVGAGQTDNRAFKAVKEAGKVVTIIPPGVPPAILFILTSDRAFLDKLGPYLESGKLKPILDPKSPFPFSQTVEAISYLETGRAAGKVVIHPIP 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi680g00008 319 Gene3D - 22 315 - -
Sebi680g00008 319 SMART PKS_ER_names_mod 25 315 IPR020843 GO:0016491
Sebi680g00008 319 Pfam Zinc-binding dehydrogenase 204 315 - -
Sebi680g00008 319 Gene3D - 151 266 - -
Sebi680g00008 319 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 159 180 IPR002364 GO:0008270|GO:0016491
Sebi680g00008 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 132 285 IPR036291 -
Sebi680g00008 319 Pfam Alcohol dehydrogenase GroES-like domain 44 103 IPR013154 -
Sebi680g00008 319 CDD MDR_like_2 16 315 - -
Sebi680g00008 319 SUPERFAMILY GroES-like 12 164 IPR011032 -
Sebi680g00008 319 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 8 319 IPR044626 GO:0016628
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi680g00008 Sebi-Chr680 235247 237286 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi680g00008 44 129 Monolignol Biosynthesis Gene Families AT2G21890 31.034 8.72e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi680g00008 K18980 - gmx:100817947 395.586