Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi680g00007 ATGGCAGCAGCTCCAACTCCAACAATACCATCTCATGTAAAAGCTTGGGTCTATTCTGAACATGGGAAGCCAAAAGATGTTCTGAAGTTCGATCCTAATTTGCCTATTCCCGAAGTCAAAGTAGATCAGGTACTAATCAAGGTTGTTGCTGCTGCCATTAATCCCATAGATTTTATAAAGATTCAAGGACATTACAAGGACAGTGACTCTCCTTTTCCAATTGTTCCAGGCTATGACGTTGCTGGTATAGTTGTCAAAGTTGGAACTGCAGTAAAGAAATTTAAGGAAGGGGATGAAGTTTATGGTATTGTTGAGGGAAAAGATGTTGGGTCTTTGGCTGAGTATACAACTGCTGCAGAGAAAGGTTTGGCTTACAAGCCACCTAATTTGAGCTTTGCTGAAGCTGCTAGCCTTCCTTTAGCAATTGAGACTGCTTATGGAAGCCTTGAGAAAATTGGGCTTTCAGCTGGTCAATCTATCCTTGTTTTAGGAGGTGGTGGTGGTGTCGGCACACTTGTTATTCAGATTGCCAAACAAGTTTTTGGTGCTTCTAAGGTGGCAGCTACTGCCAGCACTGGAAAACTGGAATTGTTGAGGAAGGTGGGAGCTGACTTGGCTATTGATTACACAAAAGAGAATTTTGAAGACCTGCCTGAAAAGTTTGATGTAGTTTATGTTGGAGCCGGACAGACTGACAGCAGGGCATTCAAGGCTGTCAAAGAAGGAGGCAAAGTAGTGACAATAATACCTCCTGAAGTTCCACCAGCTGTCTTGTTTCTAGTCCTACTCACTTCTGATGGGGCTATCTTAGAAAAACTAAGACCCTACTTGGAGAGTGGCAAGGTGAAGCCAATACTTGACCCCAAGAGCCCATTTCCATTTTCTCAGACTGTTGAAGCATTTTCCTATTTGGAAACAGGCAGAGCTGCTGGAAAAGTAGTCATCCATCCCATTCCATAA 960 0.4313 MAAAPTPTIPSHVKAWVYSEHGKPKDVLKFDPNLPIPEVKVDQVLIKVVAAAINPIDFIKIQGHYKDSDSPFPIVPGYDVAGIVVKVGTAVKKFKEGDEVYGIVEGKDVGSLAEYTTAAEKGLAYKPPNLSFAEAASLPLAIETAYGSLEKIGLSAGQSILVLGGGGGVGTLVIQIAKQVFGASKVAATASTGKLELLRKVGADLAIDYTKENFEDLPEKFDVVYVGAGQTDSRAFKAVKEGGKVVTIIPPEVPPAVLFLVLLTSDGAILEKLRPYLESGKVKPILDPKSPFPFSQTVEAFSYLETGRAAGKVVIHPIP 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi680g00007 319 Gene3D - 149 266 - -
Sebi680g00007 319 CDD MDR_like_2 14 315 - -
Sebi680g00007 319 Gene3D - 20 315 - -
Sebi680g00007 319 Pfam Alcohol dehydrogenase GroES-like domain 42 101 IPR013154 -
Sebi680g00007 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 130 286 IPR036291 -
Sebi680g00007 319 SUPERFAMILY GroES-like 10 162 IPR011032 -
Sebi680g00007 319 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 1 319 IPR044626 GO:0016628
Sebi680g00007 319 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 157 178 IPR002364 GO:0008270|GO:0016491
Sebi680g00007 319 SMART PKS_ER_names_mod 23 315 IPR020843 GO:0016491
Sebi680g00007 319 Pfam Zinc-binding dehydrogenase 202 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi680g00007 Sebi-Chr680 222547 226115 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi680g00007 42 136 Monolignol Biosynthesis Gene Families AT4G39330 30.208 1.35e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi680g00007 K18980 - qsu:112007152 431.024