Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi67g00050 ATGGAGCTTTTACAAGTTGAATCCAATGGTGTTAGAGTTTTGGGGCTGTATGGGATGGGTGGGGTTGGTAAGACAACCCTGGCCAAGGCTCTTTTCAATAGCCTTGTTGGTCGTTTTGAGCGTCGCTGCTTCATTTCAAATGTCAAACATTATTCATCCAAAGATGGTGGTTTGGTTTCTCTTCAAAGCAAAATCATTAGCGATCTTTCCCCTGAACAAGGGTCAAGAGTTCATATTATCAGTGATGTTAATGTTGGTATTAGACGAGGAACAAGATGTACTCAAGGAGTTGTTCTAGACTTTGAGGAACAAATCAAACAATGGATTACGAATTACCCTCAATATCAAGCAGAGAAAAAGAATGAGATTATACTGAATACAAAATCCTTTGAACTAATGGTTAACCTGAGACTGCTTCAGATCAATAATCTGATATTGGAAGGCAAGTTTCTTCCCGCTGAACTGAAGTGGCTACAATGGCGAGAATGTCCTTTAGAATACATGCCTTTGGACTCTTGGCCTCGAGAGCTGGCTGTCCTTGATCTCTCAAACAGCAAGAAAATAAAAAGCTTGTGGGGACTGGAAGGTTACAAGGCACCAGAGAACCTAATGGTCTTGAATCTCTCCAACTGCGTCCAACTTACTGCTATCCCTGATTTATCTGGTTGTCACCGTCTAGAGAAGATTAAACTGGAGAGCTGCAGTAATGTAAAGAGGATTCATAACTCAATTGGCAGTTTGACCGCCTTGCGTAGTTTGAATTTGAAATATTGTTCAAACCTTGTTGAGCTTCCCAGTGATGTCTCTGGGTTGACAAATCTGGAGATCATCTATCTTTCTCACTGCTTGAAGTTGAAAGCATTACCAAAAAACATAGGCAGACTGATATCTTTGAAAACACTTCTTGCTGATCACACAGCTATAGCAGAGCTTCCCCAGTCCATATACCGCCTGACCAAACTTGAACAACTTGTTTTAGATTATTGCCCACATTTGATAATGCTACCAAACTGTATTGGACATCTATGTTCTTTGCAAGAATTATCACTGAATCATTCTGGATTAAAAGAATTATCCAACTCTGTTGGCTCCTTGAAAAACCTTGAGAAATTGAGTTTGATTGGATGTGAATCTCTCAATGTAATTCCTGATTCTATAGGCAATCTCATATCGTTGACAGAACTTTTGGTTAGTAATAGTGGAATCAGAGAACTCCCTTCTTCCATCTGTTCTTTATCCTATCTGAGGAAGTTATCAGTTGGAAACTGTAAATTTCTCAGTAAATTGCCTAATTCAATCAAAACATTAGCCTCAATTCTTGAACTTAAGTTAGATGGAACAACTATCACAAATTTGCCAGATCAGATTGGAGAGATGAAACAACTAAGGAAACTTGAGATTGGGAATTGCATCCATCTTGAAGCTTTACCAGAATCTATTGGCAACCTAGCATCTCTTACTACACTGAACATTGTCAATGGAAAAATCAGGGAATTGCCGGATTCCATTGGATTGCTAGAAAATCTTGTCACCTTAAGATTGAACAGATGCAGAATGCTGAGAATGCTTCCAGCTTCTATAGGAAATTTGAAGTCTCTATGCCACTTTGAGATGGAGGAAACAGCTATGTCAGACTTACCTGAAAGTTTTGGAATGCTCTCAAGCTTGAGAACATTGAGAATGGCAAAGAGGCCTCACTTGGTTCCAAGTAATTGCAGCCTGCAACAGCAATTGCAGCCACAATATCAAGACCACATAAGTGACCGCATCCATGACTGCATCGTGACTACAATTGCAGCCTCCTCAGCCACAATTGTCCGCAAAGTTCGACATTTAATGCAACCAAAAACCATGGTTATTAACTCCAGCGAGTTTGTACGACCATCTTCCTTCGGCAATCTGACCTTGCTATATGAGCTTGATGCCCGTGCTTGGAGAATATCCGGAAGGATTCCAGATGATTTTGAGAAGTTATCATCATTAGAAACTTTAAATTTAGGCCAAAACAATTTTCACAGCCTTCCTTCCAGCTTGAAAGGCCTTTCCATTCTCAAGAAGCTTGCACTGCCAAACTGCAGGGAGCTGATCTCTCTCCCCTCACTTCCTTCAAGTTTGATTGAACTGAATGTGGAAAACTGTTCTGCATTAGAAACCATTCATGACATTTCAAATTTAGAGAGTTTGCAGGAGTTGAAATTAACAAATTGTGAGAAAGTGGTGGATATTAAAGGTCTTGAATGCTTGAAGTCCTTGAGAAGGTTATACTTGAGTGGTTGCACTGCATGCTCCTCCAGAATATGTAAAAGACTCTCAAAGGGGATGATGATTATGATGGAGACGAAGAATCATTGGACAAAGGCCTACAATCTGTCTCAGAAAGATTGGCCAAGTTTTTCAACACTTGTCAAGGTAGCGATCCTTGAAAAAAATAAAGGAGGTAGGTTGAGAATAAACCCCATTGATGGCATCTACATGAAGGCAAAGGAACTGGAACTGGATCAGCTTGGGCCAGCTTGGGACTTGAAGGCCGAAGAGCACCATCACATGGAGGGTTGA 2556 0.4045 MELLQVESNGVRVLGLYGMGGVGKTTLAKALFNSLVGRFERRCFISNVKHYSSKDGGLVSLQSKIISDLSPEQGSRVHIISDVNVGIRRGTRCTQGVVLDFEEQIKQWITNYPQYQAEKKNEIILNTKSFELMVNLRLLQINNLILEGKFLPAELKWLQWRECPLEYMPLDSWPRELAVLDLSNSKKIKSLWGLEGYKAPENLMVLNLSNCVQLTAIPDLSGCHRLEKIKLESCSNVKRIHNSIGSLTALRSLNLKYCSNLVELPSDVSGLTNLEIIYLSHCLKLKALPKNIGRLISLKTLLADHTAIAELPQSIYRLTKLEQLVLDYCPHLIMLPNCIGHLCSLQELSLNHSGLKELSNSVGSLKNLEKLSLIGCESLNVIPDSIGNLISLTELLVSNSGIRELPSSICSLSYLRKLSVGNCKFLSKLPNSIKTLASILELKLDGTTITNLPDQIGEMKQLRKLEIGNCIHLEALPESIGNLASLTTLNIVNGKIRELPDSIGLLENLVTLRLNRCRMLRMLPASIGNLKSLCHFEMEETAMSDLPESFGMLSSLRTLRMAKRPHLVPSNCSLQQQLQPQYQDHISDRIHDCIVTTIAASSATIVRKVRHLMQPKTMVINSSEFVRPSSFGNLTLLYELDARAWRISGRIPDDFEKLSSLETLNLGQNNFHSLPSSLKGLSILKKLALPNCRELISLPSLPSSLIELNVENCSALETIHDISNLESLQELKLTNCEKVVDIKGLECLKSLRRLYLSGCTACSSRICKRLSKGMMIMMETKNHWTKAYNLSQKDWPSFSTLVKVAILEKNKGGRLRINPIDGIYMKAKELELDQLGPAWDLKAEEHHHMEG 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi67g00050 851 Gene3D - 1 122 IPR027417 -
Sebi67g00050 851 PANTHER LEUCINE-RICH REPEAT-CONTAINING 301 466 - -
Sebi67g00050 851 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 71 IPR027417 -
Sebi67g00050 851 Gene3D Ribonuclease Inhibitor 289 596 IPR032675 -
Sebi67g00050 851 SUPERFAMILY L domain-like 621 760 - -
Sebi67g00050 851 PRINTS Disease resistance protein signature 723 739 - -
Sebi67g00050 851 PRINTS Disease resistance protein signature 13 28 - -
Sebi67g00050 851 PRINTS Disease resistance protein signature 426 440 - -
Sebi67g00050 851 SMART LRR_typ_2 658 680 IPR003591 -
Sebi67g00050 851 SMART LRR_typ_2 436 459 IPR003591 -
Sebi67g00050 851 SMART LRR_typ_2 483 506 IPR003591 -
Sebi67g00050 851 SMART LRR_typ_2 247 271 IPR003591 -
Sebi67g00050 851 SMART LRR_typ_2 295 318 IPR003591 -
Sebi67g00050 851 SMART LRR_typ_2 342 365 IPR003591 -
Sebi67g00050 851 SMART LRR_typ_2 389 412 IPR003591 -
Sebi67g00050 851 Gene3D Ribonuclease Inhibitor 609 788 IPR032675 -
Sebi67g00050 851 Gene3D Ribonuclease Inhibitor 123 288 IPR032675 -
Sebi67g00050 851 ProSiteProfiles Leucine-rich repeat profile. 660 682 IPR001611 GO:0005515
Sebi67g00050 851 Pfam NB-ARC domain 6 74 IPR002182 GO:0043531
Sebi67g00050 851 SUPERFAMILY L domain-like 285 587 - -
Sebi67g00050 851 SUPERFAMILY L domain-like 154 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi67g00050 Sebi-Chr67 2202090 2207170 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi67g00050 250 628 WRKY Transcription Factor Family AT4G12020 26.065 3.57e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi67g00050 - - mtr:11408681 886.33