Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi67g00048 ATGGCTGTTTTGAAGAGTGAGAAGGGAACAAGATGTATTCAAGGAATTGTCCTAGACTTTGAGGATCAATTAAAACGATGGAATACAAATTATCTTCAATCTCAAGCAAAGGAAAACAACGAGGTTATACTTCAGACGAAATCCTTTGGACCAATGGTTAACCTGAGACTGCTTCAGATTAATCATCTGAGATTGGAAGGCAAGTACCTTCCAGCTGAACTGAAGTGGCTAAAATGGCGAGGATGTCCTTTAGAATGCATTCCTTTGGACTCTTGGCCTCGAGAGTTGGCTGTCCTTGATCTCTCAAACAGCAACAAAATAAAATACTTGTGGGGACAAGAAGGTGACAAGGTACCACAGAACCTAATGGTCATGAACCTCTCCTACTGCATCCAACTTTCTGCACTCCCTGATTTATCTACGTGTAGCCATCTAGAGAAGATTGATCTGGAGAACTGCATTAATCTAACTAGGATCCATGAATCAATTGGCAGTTTGACTAGCTTACGTGGTTTGAATTTGACAAGGTGTTCAAAACTCATTGACCTTCCCAGTGATGTTTCTAGACTGAAACATCTAGAGAACCTCTTTCTTTCTCAATGCTCAAAGTTGAAAGCATTACCCAAAAGCATAGGCAACCTGAAATCCTTGAAAACACTTTTTGCTGATAACACAGCTATACCAGAGCTTCCCCAGTCCATTTTCCGCCTGACCAAACTCAAACGGCTTGTTTTAGATCATTGCCTATATTTGAGAAGGCTACCAAACTGCATTGGGCATCTATGTTCTTTGCAAGAATTATCTCTTGATTTTTCTGGGTTAGAAGAATTACCCAACTCTATTGGATCCTTGAAAAACCTTGAGACATTCAGTTTGATTGGGTGTAAATTTCTCACTGTGATTCCTGACTCTATAGGCAATCTCATATCATTGACAGAAGTTTTGTTTACTAACAGTGGAATTACAGAACTCCCTGCTACCATCGGTTCTTTATCCTATCTGAGGAAGCTATCTGCTGGACACTGTAAATTTCTCAGTGAACTACCTGATTCAATGAAAAGTTTGGCCTCAATAGTTGAACTTCAGTTAGATGGAACAACTATCACAAATTTGCCAGATCAGATTGGAGAGATGAAACAGCTGAGGACACTTGAGATTGGTAATTGTATCCATCTTGAAACTTTACCGGAATCTATTGGCAACCTAGCATCGCTTACTACACTGAACATAGTCAATGGAAAAATCAGGGAATTGCCAGATTCCATTGGATTACTGGAAAATCTTGTCACCTTAGTATTGAACAAGTGCAGAATGCTCAGAAAGCTTCCAGCTTCAATAGGAAATTTGAAATCTCTATGCCACTTTGAGATGGAGGAAATGGCTATGTCAGACTTACCTGAAAGTTTTGGGATGCTCTCAAGCTTGAGAACATTGAGAATGGCAAAGAGGCCTCATTTTGTTCCCACTGAAAATAGCTTTCTCGCAGGACCTGAAGTAGTTCCCATTTCTGTAGAGAACCCCAGCTCTTTTGTACTTCCATCTTCCTTCTGCAATCTTACCTTGCTATATGAGCTGGATGCCAGTGCCTGGAGAATATCCGGAAAGATTCCAGATGATTTTGAGAAGTTATCATCATTAGAAACTTTAAAATTGGGACAAAACAATTTTCACAGCCTTCCTTCCAGCTTGAAAGGCCTTTCCATTCTCAAGAAGCTGGCACTGCCAAACTGCAGGGAGCTGATCTCTCTCCCCTCACTTCCTTCAAGCTTGATTGAACTGAACGTTGAAAACTGTTCTGCATTAGAAACCATTCATGACATTTCAAATTTAGAGAATTTGCAGGAGTTAAAACTCACAAATTGTGAAAAAGTCGTGGATATTCCAGGTCTAGAATGCTTGAAGTCCTTGAGAAGGTTGTACCTGAGTGGTTGCACTGCATGCTCCTCCCAAATATGTAAAAGACTCTCAAAGGTTGCATTGACGAATTTGGAGAACTTGAGCATGCCAGGAGCCAGATTACCTGAATGGTTTTCAGGACAAACTGTCAGCTTTTCCAAGCCCAAAAATCTTGAACTAAAAGGTGTAATTATAGGTGTTATTTTTTCAATCAACCATAATATACCAAATATAATGAGAGATAAAATGCCTGGAATGTTAGATGTTCAAGCAAATGTTCTCAAACAGGGCAAAACTATTTTCAGAACAGTGTTAAACATACGTGGGGTGCCAAGGACGGATGAGGAACACATACACTTGTGTAGGTACCAAGATTACCATCAGTTGGTTGCCTTTTTAAGAGATGCTGATACATTTTGTGTGACTATGAGAAGTCCTCCTTTTGATAAGGGGTTGGAGTTGAAAAAATGTGGGGTTCATTTAATCTTTGAAGGGGATGATGATTATGACGGAGATGAAGAATCATTGGACAAAGGCCTGCAATCTGTTTCAGAAAGATTGGCCAAGTTTTTCAACACTTGTGAAGATGGCCATCCCATCTATGCCACTGAGAGTGAAGATGTGTACCAAAAGGAATTGGAGCAGGAACAACAAGAGCCAAGATCATCTCGTATTATTACACTTAAAAGCCCACTCCCAAAACGGCGCAACCATGCGAACATAGTAGAAGCAGAACCCACATAA 2640 0.4023 MAVLKSEKGTRCIQGIVLDFEDQLKRWNTNYLQSQAKENNEVILQTKSFGPMVNLRLLQINHLRLEGKYLPAELKWLKWRGCPLECIPLDSWPRELAVLDLSNSNKIKYLWGQEGDKVPQNLMVMNLSYCIQLSALPDLSTCSHLEKIDLENCINLTRIHESIGSLTSLRGLNLTRCSKLIDLPSDVSRLKHLENLFLSQCSKLKALPKSIGNLKSLKTLFADNTAIPELPQSIFRLTKLKRLVLDHCLYLRRLPNCIGHLCSLQELSLDFSGLEELPNSIGSLKNLETFSLIGCKFLTVIPDSIGNLISLTEVLFTNSGITELPATIGSLSYLRKLSAGHCKFLSELPDSMKSLASIVELQLDGTTITNLPDQIGEMKQLRTLEIGNCIHLETLPESIGNLASLTTLNIVNGKIRELPDSIGLLENLVTLVLNKCRMLRKLPASIGNLKSLCHFEMEEMAMSDLPESFGMLSSLRTLRMAKRPHFVPTENSFLAGPEVVPISVENPSSFVLPSSFCNLTLLYELDASAWRISGKIPDDFEKLSSLETLKLGQNNFHSLPSSLKGLSILKKLALPNCRELISLPSLPSSLIELNVENCSALETIHDISNLENLQELKLTNCEKVVDIPGLECLKSLRRLYLSGCTACSSQICKRLSKVALTNLENLSMPGARLPEWFSGQTVSFSKPKNLELKGVIIGVIFSINHNIPNIMRDKMPGMLDVQANVLKQGKTIFRTVLNIRGVPRTDEEHIHLCRYQDYHQLVAFLRDADTFCVTMRSPPFDKGLELKKCGVHLIFEGDDDYDGDEESLDKGLQSVSERLAKFFNTCEDGHPIYATESEDVYQKELEQEQQEPRSSRIITLKSPLPKRRNHANIVEAEPT 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi67g00048 879 SUPERFAMILY L domain-like 73 271 - -
Sebi67g00048 879 SUPERFAMILY L domain-like 512 691 - -
Sebi67g00048 879 SMART LRR_CC_2 284 311 IPR006553 -
Sebi67g00048 879 SMART LRR_CC_2 331 358 IPR006553 -
Sebi67g00048 879 SMART LRR_CC_2 378 405 IPR006553 -
Sebi67g00048 879 SMART LRR_CC_2 610 636 IPR006553 -
Sebi67g00048 879 SMART LRR_CC_2 142 169 IPR006553 -
Sebi67g00048 879 Gene3D Ribonuclease Inhibitor 502 727 IPR032675 -
Sebi67g00048 879 SUPERFAMILY L domain-like 206 480 - -
Sebi67g00048 879 PANTHER - 391 602 - -
Sebi67g00048 879 SMART LRR_typ_2 308 331 IPR003591 -
Sebi67g00048 879 SMART LRR_typ_2 402 425 IPR003591 -
Sebi67g00048 879 SMART LRR_typ_2 214 237 IPR003591 -
Sebi67g00048 879 SMART LRR_typ_2 355 378 IPR003591 -
Sebi67g00048 879 SMART LRR_typ_2 543 565 IPR003591 -
Sebi67g00048 879 SMART LRR_typ_2 261 284 IPR003591 -
Sebi67g00048 879 MobiDBLite consensus disorder prediction 841 879 - -
Sebi67g00048 879 Gene3D Ribonuclease Inhibitor 207 494 IPR032675 -
Sebi67g00048 879 Gene3D Ribonuclease Inhibitor 23 206 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi67g00048 Sebi-Chr67 1906963 2025340 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi67g00048 181 437 WRKY Transcription Factor Family AT4G12020 27.799 1.04e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi67g00048 - - mtr:11408681 1217.99