Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi67g00046 ACTGCTAATTTGGACGGGGAAACCAATTTGAAGATTAGGAAAGCATTGGAAAAGACATGGGATTACCTGACTCCGGAAAAGGCATCTGAGTTTAAAGGTGAAATTCAATGTGAACAACCAAACAATTCATTGTATACCTTCACTGGAAATTTATTAATTCAAAAGCAAACACTTCCAATCAGTCCAAACCAAATTTTGTTACGAGGATGCAGTCTTCGGAATACAGAGTATATTGTTGGGGCTGTTATTTTTACTGGGCATGAAACAAAGGTGATGATGAATTCAATGAATGTGCCTTCCAAAAGAAGTACATTGGAGAGGAAGCTTGACAAGCTCATACTCACTCTATTTGCAACTCTCTTTGTGATGTGTTTTATTGGAGCCATAGGCAGTGCTATCTTTGTAAACAAGAAGCATTTTTACTTACATCTTGATTCATCAGAGGAGGGCTCAGCACAATTCAACCCGAGAAACAGATTTTTGGTTTTTCTTCTGACTATGTTTACCCTTATCACACTATACTCGACAATCATCCCCATTTCACTTTATGTGTCTATAGAGATGATAAAATTTATTCAGTCAACTCAATTTATCAACAAGGATTTGTGCATGTACCATAATGAAACCAATACACCTGCGTTGGCCAGAACATCAAATCTGAATGAAGAACTTGGGCAGGTGGAGTACATTTTCTCTGATAAAACTGGGACTCTAACAAGAAACTTGATGGAGTTCTTCAAGTGTTCAATTGGAGGAGATGTCTATGGAAATGGTGTGACTGAAATTGAGAGGGGAATAGCAGAGCGCGATGGCATGAAAATTGAGGAAAATAGATCACCCAATGCTGTGCAAGAGAAGGGTTTTAATTTTGAGGATGCTAGGCTTATGAGAGGAGCTTGGAGGAATGAGCCTAATCCTGATGTCTGCAAGGAATTCTTCAGATGCCTTGCTATATGCCATACTGTACTTCCTGAGGGTGATGAGTCCCCAGAAAAGATCAGATATCAGGCTGCATCACCTGACGAGGCTGCTTTGGTTATTGCTGCAAAGAACTTTGGTTTCTTCTTCTACAGGCGCACACCTACCATGATATATGTTCGTGAATCTCATGTTGAGAAGATGGGCAAAATTCAAGATGTATCTTATGAGATTTTAAATGTGCTTGAGTTTAATAGTACAAGGAAGCGTCAGTCTGTTGTATGTCGATATCCAGATGGAAGGCTTGTACTATACTGTAAGGGTGCTGATACAGTAATCTACGAGAGACTGGCCGATGGTAATAATGATATCAAGAAAATCACTAGGGAGCATTTGGAACAATTCGGATCTGCTGGACTACGTACATTGTGCCTGGCCTACAGAGAATTGCATCCTGATGTTTATGAAAGCTGGAATGAGAAGTTTATCCAGGCCAAGTCTTCTCTGCATGATCGTGAAAAGAAGTTAGACGAGGTGGCAGAACTAATAGAAAAGGATCTCATTTTAATTGGTAGCACTGCAATAGAAGACAAGCTTCAAGAGGGAGTGCCAGCTTGCATAGAGACTCTTCAAAGAGCCGGTATTAAAATTTGGGTTCTGACAGGTGACAAGATTGAAACAGCAATAAACATAGCCTATGCATGCAATTTAATAAACAATGAGATGAAGCAATTTGTTATCAGTTCAGAAACCGATGCAATTAGAGAAGTTGAAGATAGGGGTGATCAAATAGAAATTGCACGTTTTATTAAAGAAGAAGTGAAAAAAAGAGCTGAAGAATGTCTAATGTATGCATTGGATCCAAGTTTAAGAGTGATGCTGCTGAATCTAAGTTTGAATTGTCATGCTGTTGTTTGCTGCCGAGTTTCTCCCTTACAGAAAGCACAGGTCACAAGTATGGTCAAGAAAGGTGCACGGAAAATAACACTTAGTATTGGTGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCATAAGTGGGTTGGAGGGAATGCAAGCTGTTATGGCTAGTGATTTTGCCATTGCACAGTTCGTTACCTTGCAGATTTGCTTCTTGTTCATGGCCGGTGGTCATATTTGCGAATATGCAAGGTGGTGA 2094 0.3988 TANLDGETNLKIRKALEKTWDYLTPEKASEFKGEIQCEQPNNSLYTFTGNLLIQKQTLPISPNQILLRGCSLRNTEYIVGAVIFTGHETKVMMNSMNVPSKRSTLERKLDKLILTLFATLFVMCFIGAIGSAIFVNKKHFYLHLDSSEEGSAQFNPRNRFLVFLLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLCMYHNETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGDVYGNGVTEIERGIAERDGMKIEENRSPNAVQEKGFNFEDARLMRGAWRNEPNPDVCKEFFRCLAICHTVLPEGDESPEKIRYQAASPDEAALVIAAKNFGFFFYRRTPTMIYVRESHVEKMGKIQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADTVIYERLADGNNDIKKITREHLEQFGSAGLRTLCLAYRELHPDVYESWNEKFIQAKSSLHDREKKLDEVAELIEKDLILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFVISSETDAIREVEDRGDQIEIARFIKEEVKKRAEECLMYALDPSLRVMLLNLSLNCHAVVCCRVSPLQKAQVTSMVKKGARKITLSIGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFVTLQICFLFMAGGHICEYARW 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi67g00046 697 Gene3D - 495 676 IPR023214 -
Sebi67g00046 697 FunFam Phospholipid-transporting ATPase IC 228 240 - -
Sebi67g00046 697 NCBIfam HAD-IC family P-type ATPase 611 677 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi67g00046 697 SFLD C1.7: P-type atpase like 213 680 - -
Sebi67g00046 697 FunFam Phospholipid-transporting ATPase 339 494 - -
Sebi67g00046 697 ProSitePatterns E1-E2 ATPases phosphorylation site. 233 239 IPR018303 -
Sebi67g00046 697 Gene3D - 360 494 IPR023299 GO:0000166
Sebi67g00046 697 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 295 500 IPR023299 GO:0000166
Sebi67g00046 697 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 681 - -
Sebi67g00046 697 Pfam Cation transport ATPase (P-type) 328 422 - -
Sebi67g00046 697 NCBIfam phospholipid-translocating P-type ATPase 1 683 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Sebi67g00046 697 PRINTS P-type cation-transporting ATPase superfamily signature 231 245 - -
Sebi67g00046 697 PRINTS P-type cation-transporting ATPase superfamily signature 638 657 - -
Sebi67g00046 697 PRINTS P-type cation-transporting ATPase superfamily signature 519 529 - -
Sebi67g00046 697 SFLD p-type atpase 213 680 IPR044492 -
Sebi67g00046 697 SUPERFAMILY Calcium ATPase, transmembrane domain M 96 225 IPR023298 -
Sebi67g00046 697 FunFam Phospholipid-transporting ATPase 496 678 - -
Sebi67g00046 697 SUPERFAMILY HAD-like 219 676 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi67g00046 Sebi-Chr67 1857383 1870116 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi67g00046 1 676 Primary Pumps ATPases AT1G59820 80.029 0.0 1167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi67g00046 K14802 - gmx:100815547 1283.47