Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi67g00041 ATGATGAATATGAGATTTTTGAAATTTTACTCACCATCAGGAGTTGGGTATTCTAAATTGCACCTTTCCTCACATCTCCAATTGTTTTCTGATAAATTAAGGTATCTAGAGTGGCATGGATTTCCTTCAAGGTCTCTGCCTCTAATATTTTGTCCGGAGAAGCTTGTTGAGCTTTTAATGCCAAACAGCCAGCTTGAGAAACTTTGGGATGGAGTGCAGGATTTGGCTAATTTAAAAAGAGTAGATCTTCGTGGATCCAAAAGGTTGATTGAACTCCCAGATTTCTCTCTGTCGTCAAATCTTGAAGAAGTAAATCTCTCCAAGTGTGAAAGTTTGTGTCGTGTTCATCCATCTCTCTTATCTCTCCCCTCACTAGTTTCTTTGAATGTATCAGCGTGCATAATCATTAAGTGTTTGCCTGCAAGCATCAACCAGCTTCCAAAGCTGAAATATCTTGACTTAAGTGATTGCAAGAGGCTTGAGTCCCTGCCAGAACTTCCACAATCAATTGAAGCGATATATCTAAGTGGAAGCAATATTAAGTGTTTGCCTGCAAGCATCAACCAGCTTCCAAAGCTGAAATATCTTCACTTAAGTGATTGCAAGAGGCTTGAGTCCCTGCCAGAACTTCCACAATCAATTGAAGCGATATATCTAAGTGGAAGCAATATTAAGTGTTTGCCTGCAAGCATCAACCAGCTTCCAAAGCTGAGACATCTTGACTTAAGTGATTGCAAGAGGCTTGATTCCATGCCAGAACTTCCACAATCAATTGAAGTGATACATCTAGGTGGAAGCAATAAGTGTTTGCCTGCAAGCATCAACCAGCTTCCAAAGCTGAAACATCTTGACTTAAGTGATTGCAAGAGGCTTGATTCCCTGTCAGAACTTCCACAATCAATTGAATACATATATCTAAGTGGAAGCAATATTAAGTGTTTGCCTGCAAGCATCAACCAACTTCCAAAGCTGAAATATCTTGACATAATGGATTGCAAGATGCTTCAAGCTGTGCCAGAGCTTCCACAATCATTTGTAAAGTTTTGA 1047 0.3973 MMNMRFLKFYSPSGVGYSKLHLSSHLQLFSDKLRYLEWHGFPSRSLPLIFCPEKLVELLMPNSQLEKLWDGVQDLANLKRVDLRGSKRLIELPDFSLSSNLEEVNLSKCESLCRVHPSLLSLPSLVSLNVSACIIIKCLPASINQLPKLKYLDLSDCKRLESLPELPQSIEAIYLSGSNIKCLPASINQLPKLKYLHLSDCKRLESLPELPQSIEAIYLSGSNIKCLPASINQLPKLRHLDLSDCKRLDSMPELPQSIEVIHLGGSNKCLPASINQLPKLKHLDLSDCKRLDSLSELPQSIEYIYLSGSNIKCLPASINQLPKLKYLDIMDCKMLQAVPELPQSFVKF 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi67g00041 348 SMART LRR_CC_2 146 179 IPR006553 -
Sebi67g00041 348 SMART LRR_CC_2 190 223 IPR006553 -
Sebi67g00041 348 SMART LRR_CC_2 234 266 IPR006553 -
Sebi67g00041 348 SMART LRR_CC_2 277 307 IPR006553 -
Sebi67g00041 348 Pfam Leucine Rich Repeat 54 73 IPR011713 -
Sebi67g00041 348 SMART LRR_bac_2 211 230 - -
Sebi67g00041 348 SMART LRR_bac_2 298 317 - -
Sebi67g00041 348 SMART LRR_bac_2 167 186 - -
Sebi67g00041 348 SMART LRR_bac_2 146 166 - -
Sebi67g00041 348 SMART LRR_bac_2 190 210 - -
Sebi67g00041 348 SUPERFAMILY L domain-like 4 339 - -
Sebi67g00041 348 Pfam Leucine Rich Repeat 236 248 IPR001611 GO:0005515
Sebi67g00041 348 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 146 254 - -
Sebi67g00041 348 Gene3D Ribonuclease Inhibitor 261 347 IPR032675 -
Sebi67g00041 348 Gene3D Ribonuclease Inhibitor 171 260 IPR032675 -
Sebi67g00041 348 Gene3D Ribonuclease Inhibitor 16 170 IPR032675 -
Sebi67g00041 348 Pfam Leucine Rich repeat 146 158 IPR001611 GO:0005515
Sebi67g00041 348 Pfam Leucine Rich repeat 277 289 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi67g00041 Sebi-Chr67 1586301 1587427 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi67g00041 1 338 WRKY Transcription Factor Family AT5G45050 31.214 1.04e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi67g00041 - - lang:109349632 310.842