Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi67g00033 ATGTACTTACTGGGCTCAGTTGTTCATATTAGAATTGGATTAACTGGATCCATTCCAGAGAACACCTTAGGAAAACAAGATGCTCTTAGGGTCTTGAGCCTTCATTCGAATGGACTTGGAGGAAGTCTTCCTTCTAACACCCTTTCCATTCCTTTACTCCAATTTGCACACTTGCAACACAATAACCTCTTAGGTCTAATTCCTTCCTCTGTCTCCCCTAGACTCATTGCATTAGATCTTTCCTTTAACTCCTTCTCTGCCAGTATCCTACCTACATTTCAAAACATAAGAAGACTCATCTGGTTGTATGTCCAAAACAATTCCATATCCGGAATTATCCCTGACTTCAACCTTCCAAGTCTCAAACATTTGAATTTGAGCTATAATAACTTGAATGGCTCAATTCCAAATTCCATCAAGACATTCCCTTATAGTTCTCTTCTTGGGAACTCTCTCTTATGTGAGCCACCTCTCAATCATTGCTCTACAAACTCCCCTTGTTCATCTCCTTCCTCTTCTCACCAGCCACTCTCTCCTACAACCACTCAAAACCAAAAAGCTGCTGCTACCCATAAGAAAAGCTTTGGCCTTGCTGTAATACTTGCTCTAATCTTTGGGAGCATTGCCTTCTTCTCTCTACTATTTTTAGTGATCTCTGTATGCTGTATGAAGAGGAAAAACAGTAAAAGCAATGGCGTACTGAAAGGAAAGGCATCTTGTGCTAGAAATACTGAAGTTTCAAAGAGTTATGGGAGTGGGGTGCAAACGCCTGAAAAGAACAAGCTATTTTTCTTTGAAGGTTCCTCTTATAGCTTTGACCTTGAGGATTTACTAAAAGCTTCAACTGAAGTTCTTGGAAAAGGAAGCTATGGAACAACATACAAGGCTGTTTTGGAAAGGGAACAACAATGGGGTGCGGGAAGAACTCCATTAGATTGGGATTCTAGAGTGAAACTTGCACTTGGAGCTGCTAAGGGAATTGCTTTCATTCACTCTGGAGGGGGTCCAAAATTTGCACATGGAAACATTAAGTCAACCAATGTGCTCATAACTCAAGAACTTGATAGCTACATCTCTGATGTTGGATTGCCTCCTCTGATGAATGCCCCATCAACCATGTCTAGAGCCAATGGCTATAGAGCTCCAGAAGTTACTGATTCCAGAAAGATCACACAGAAGTCTGATGTTTACAACTTTGGTGTGGTGCTTCTTGAAATACTTACAGGCAAGACTCCACTGATATATCCTAGCTACGAGGATGTGGTTGATCTTCCAAGGTGGGTGAGGTGTGTTGTTAGAGAGGAATGGACTGCTGAAGTGTTTGATGAGGAGCTTCTGAGAGGGCAATATGTTGAAGAGGAAATGGTGCAGATGCTTCAGATTGCACTGACATGTGTAGCTAAGGCACCCGATATGAGGCCTAAAATGGATGAAGCTGTTAGAATGATAGAGGAAATTAAACAGCCTGAGTTGAAGAACATGCCATCCTTTGAGTCTGACTCTAATGTGCTGACACCATGA 1521 0.4175 MYLLGSVVHIRIGLTGSIPENTLGKQDALRVLSLHSNGLGGSLPSNTLSIPLLQFAHLQHNNLLGLIPSSVSPRLIALDLSFNSFSASILPTFQNIRRLIWLYVQNNSISGIIPDFNLPSLKHLNLSYNNLNGSIPNSIKTFPYSSLLGNSLLCEPPLNHCSTNSPCSSPSSSHQPLSPTTTQNQKAAATHKKSFGLAVILALIFGSIAFFSLLFLVISVCCMKRKNSKSNGVLKGKASCARNTEVSKSYGSGVQTPEKNKLFFFEGSSYSFDLEDLLKASTEVLGKGSYGTTYKAVLEREQQWGAGRTPLDWDSRVKLALGAAKGIAFIHSGGGPKFAHGNIKSTNVLITQELDSYISDVGLPPLMNAPSTMSRANGYRAPEVTDSRKITQKSDVYNFGVVLLEILTGKTPLIYPSYEDVVDLPRWVRCVVREEWTAEVFDEELLRGQYVEEEMVQMLQIALTCVAKAPDMRPKMDEAVRMIEEIKQPELKNMPSFESDSNVLTP 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi67g00033 506 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 291 496 - -
Sebi67g00033 506 ProSiteProfiles Leucine-rich repeat profile. 120 142 IPR001611 GO:0005515
Sebi67g00033 506 Gene3D Transferase(Phosphotransferase) domain 1 295 503 - -
Sebi67g00033 506 ProSiteProfiles Protein kinase domain profile. 199 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi67g00033 506 SUPERFAMILY L domain-like 17 157 - -
Sebi67g00033 506 Gene3D Ribonuclease Inhibitor 11 167 IPR032675 -
Sebi67g00033 506 PANTHER OS05G0588300 PROTEIN 307 495 - -
Sebi67g00033 506 SUPERFAMILY Protein kinase-like (PK-like) 283 484 IPR011009 -
Sebi67g00033 506 MobiDBLite consensus disorder prediction 165 185 - -
Sebi67g00033 506 FunFam Leucine-rich repeat receptor-like protein kinase 72 161 - -
Sebi67g00033 506 Pfam Leucine Rich Repeat 120 141 IPR001611 GO:0005515
Sebi67g00033 506 Pfam Protein tyrosine and serine/threonine kinase 296 481 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi67g00033 Sebi-Chr67 1403900 1405806 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi67g00033 12 487 Receptor kinase-like Gene Family AT5G58300 45.756 3.72e-144 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sebi67g00033 PK_Tyr_Ser-Thr 5.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi67g00033 - - gmx:100775340 574.704