Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi67g00032 ATGGCGCCGAAGCAGAGCACAAGGAAGGTTAGCAGAAACCCTGAATTGATAAGGGGAATCAGAAAATACTCGAGGTCCCAGATGTACCACAAGAGGGGCATCTGGGCTATCAAGGCCAAAAACGGCGGTGTTTTACCTCGCCACGATCCCAAACCTAAACCTGAAGCTCCTGCGGAGAAACCACCCAAATTTTACCCTGCTGATGATGTCAAGAAGCCCCTCATCAACAAGCACAAGCCAAAACCCGCTAAGCTCAGGGCTAGCATTACTCCCGGAACAGTGCTGATTCTTCTTGCTGGTAGATTTAAGGGAAAGAGGGTAGTGTTTTTGAAGCAGCTTCCTTCTGGTTTGCTTCTTGTAACTGGTCCTTTTAAGATTAATGGAGTTCCTTTGAGACGTGTGAACCAGTCCTATGTGATTGGCACATCAACCAAAGTGGATGTCTCTGCTGTTAATGTGGATAAATTTGATGACAAGTATTTTGCAAAGGAAGCCCAGAAAAAGAAGAAGGGAGAAGGAGAGTTCTTTGAGGCTGAGAAGGAGGAGAAAAATGTGTTGCCCCAGGAGAAGAAAGATGACCAGAAAACCGTCGACTCTGCATTGGTAAAGGCCATTGAGAGTGTTCCAGACTTGAAGGCTTATCTGGGTGCCAGTATTGAACTTGGTCCAAATAGGTCATCTGTATGCCAATTGTTGGACAATAACTTCTCAGGTCTAATTCCTTCCTCTGTCTCACCTAGACTCATTGCATTAGACCTTTCCTTTAACTCCTTCTCTGGCAGTATCCCACCTGCATTTCAGAACCTAAGAAGACTCATCTGGTTGTATCTCCAAAACAATTCCATATCTGGAACTATCCCTAACTTCAACCTTCCATGTCTCAAACATTTGAATTTGAGCTATAATAACTTGAATGGCTCAATTCCAAATTCCATCAAGACCTTCCCTTATAGTTCTTTTCTTGGGAATTCTCTCTTATGTGGGCCACCTCTCAATCATTTCTCTACAATCTCCCCTTCTCCATCTCCTTCCTCTTCTCACCAGCCACTCTCTCCTGCAACCACTCAAAACCAAAAAGCTGCTGCTACCCATAAGAAAAGCTTTGGCCTTGCTGAAAGGCATCTTGTGCTTGGAAAAACTGAAGTTTCAAAGAGTTTTGGGAGTGGGGTGCAAACGGCTGAAAAGGACAAGCTATTTTTCTTTGAAGGTTCCTCTTATAGCTTTGACCTTGAGGATTTACCAAAAGCTTCAGCTGAAGTTCTTGGAAAAGGAAGCTGTGGAACAGCATACAAGGCCGTTTTGGAAGAGGGAACAACAGTGGTAGTTAAAAGGTTGAAGGAAGTTCTTGGATCCTGA 1356 0.4417 MAPKQSTRKVSRNPELIRGIRKYSRSQMYHKRGIWAIKAKNGGVLPRHDPKPKPEAPAEKPPKFYPADDVKKPLINKHKPKPAKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDVSAVNVDKFDDKYFAKEAQKKKKGEGEFFEAEKEEKNVLPQEKKDDQKTVDSALVKAIESVPDLKAYLGASIELGPNRSSVCQLLDNNFSGLIPSSVSPRLIALDLSFNSFSGSIPPAFQNLRRLIWLYLQNNSISGTIPNFNLPCLKHLNLSYNNLNGSIPNSIKTFPYSSFLGNSLLCGPPLNHFSTISPSPSPSSSHQPLSPATTQNQKAAATHKKSFGLAERHLVLGKTEVSKSFGSGVQTAEKDKLFFFEGSSYSFDLEDLPKASAEVLGKGSCGTAYKAVLEEGTTVVVKRLKEVLGS 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi67g00032 451 Gene3D Ribonuclease Inhibitor 208 337 IPR032675 -
Sebi67g00032 451 SUPERFAMILY L domain-like 231 328 - -
Sebi67g00032 451 CDD KOW_RPL6 81 224 IPR041997 -
Sebi67g00032 451 MobiDBLite consensus disorder prediction 40 83 - -
Sebi67g00032 451 Gene3D - 87 170 IPR014722 -
Sebi67g00032 451 PANTHER 60S RIBOSOMAL PROTEIN L6 3 222 IPR000915 GO:0003735|GO:0005840|GO:0006412
Sebi67g00032 451 MobiDBLite consensus disorder prediction 44 76 - -
Sebi67g00032 451 Pfam Leucine Rich Repeat 248 269 IPR001611 GO:0005515
Sebi67g00032 451 Pfam Leucine Rich Repeat 294 314 IPR001611 GO:0005515
Sebi67g00032 451 FunFam 60S ribosomal protein L6 87 171 - -
Sebi67g00032 451 Pfam Ribosomal protein L6e 126 222 IPR000915 GO:0003735|GO:0005840|GO:0006412
Sebi67g00032 451 SUPERFAMILY Translation proteins SH3-like domain 87 177 IPR008991 -
Sebi67g00032 451 Gene3D Phosphorylase Kinase; domain 1 381 450 - -
Sebi67g00032 451 MobiDBLite consensus disorder prediction 337 363 - -
Sebi67g00032 451 FunFam Leucine-rich repeat receptor-like protein kinase 245 334 - -
Sebi67g00032 451 Pfam Ribosomal protein L6, N-terminal domain 3 61 IPR005568 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi67g00032 Sebi-Chr67 1397856 1401048 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi67g00032 1 221 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 79.279 7.02e-108 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi67g00032 K02934 - gmx:100499766 363.999