Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi67g00031 ATGAGACAAGACATGAAGTTGCAGTTCTCTATTGTTGCTCTTGTTCTATTTAGCTCCATACTGTCTCTTTTTGGCTTGATTGTAGCTGACTTGAACTCTGACCGACAAGCTCTCTTGGAGTTTGCTTCTTCTGTCCCACATGCCCCAAGGCTCAACTGGAATGACTCTTCTTCAATTTGTACCTCATGGGTTGGTGTGACTTGCAACTCAAATGGAACTCGTGTCATAGGTATCCATCTTCTAGGAATTGGATTAACTGGGTCCATTCCAGAGAACACCTTAGGAAAACTAGATGCTCTTAAGAGGAAAAACAGTAAAAGTAGTGGCATACTGAAAGGAAAGGCATCTTGTGCTAAAAAAACTGAAGTTTCAAAGAGTTTTGGGAGTGGGGTGCAAACGGCTGAAAAGAACAAGCTATTTTTCTTTGAAGGTTACTCTTATAGCTTTGACCTTGAGGATTTACTAAAAGCTTCAGCTGAAGTTCTTGGAAAAGGAAGCTATGGAACAACGTACAAGGCTGTTTTGGAAGAGGGAACAACAGTGATGGAGATTGTGGGAAAGATTGGACACCACCCCAATGTCATGCCTCTTCGAGCTTATTACTATTCCAAAGATGAGAAACTTCTAGTTTACAACTACATGCAAGGAGGCAGCTTGTTTTTCTTGTTGCATGGAAATAGGGGTGCAGGAAGAACTCCATTAGATTTGGATTCTAGAGTGAAACTTGCACTTGGAGCTGCTAAGGGAATTGCTTTCATTCACTCTGAAGGGGGTCCAAAATTTGCACATGGCAACATTAAGTCCACCAATGTGCTCATAACTCAAGAACTTGATAGCTGCATCTCTGATGTTGGATTGCCTCGTCTGATGAATGCCCCATCAACCATGTCTAGAGCCAATGGCTATAGAGCTCCAAAAGTTACTGATTCCAGAAAGATCGCACAGAAGTTTGATGTTTACAGCTTTGGTGTGGTGCTTCTTGAAATGCTTACAAGCAAGACTCCACTGAGATATCATGACTATGAGGATGTGGTTGATCTTCCAAGGTGGGTGAGGTCTGTTGTTAGAGAGGAATGGACTGCTAAAGTGTTTGATGAGGAGCTTCTGAGAGGGCAATATGTTGAAGAGGAAATGGTGCAGATGCTTCAGATTGCACTGGTATGTGTAGCTAAGGCACCAAATATGAGGCCTAAAATGGATGAAGCTGTTAGAATGATAGAGGAAATTAAACAGCCTGAGTTGAAGAACAGGCCATCCTCTGAGTCTGACTCTAATGTGCAGACACCAGAAGATTGA 1296 0.4236 MRQDMKLQFSIVALVLFSSILSLFGLIVADLNSDRQALLEFASSVPHAPRLNWNDSSSICTSWVGVTCNSNGTRVIGIHLLGIGLTGSIPENTLGKLDALKRKNSKSSGILKGKASCAKKTEVSKSFGSGVQTAEKNKLFFFEGYSYSFDLEDLLKASAEVLGKGSYGTTYKAVLEEGTTVMEIVGKIGHHPNVMPLRAYYYSKDEKLLVYNYMQGGSLFFLLHGNRGAGRTPLDLDSRVKLALGAAKGIAFIHSEGGPKFAHGNIKSTNVLITQELDSCISDVGLPRLMNAPSTMSRANGYRAPKVTDSRKIAQKFDVYSFGVVLLEMLTSKTPLRYHDYEDVVDLPRWVRSVVREEWTAKVFDEELLRGQYVEEEMVQMLQIALVCVAKAPNMRPKMDEAVRMIEEIKQPELKNRPSSESDSNVQTPED 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi67g00031 431 ProSitePatterns Protein kinases ATP-binding region signature. 162 187 IPR017441 GO:0005524
Sebi67g00031 431 Gene3D Transferase(Phosphotransferase) domain 1 150 413 - -
Sebi67g00031 431 SUPERFAMILY Protein kinase-like (PK-like) 160 407 IPR011009 -
Sebi67g00031 431 ProSiteProfiles Protein kinase domain profile. 75 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi67g00031 431 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 214 420 - -
Sebi67g00031 431 PANTHER OS05G0588300 PROTEIN 15 102 - -
Sebi67g00031 431 Pfam Leucine rich repeat N-terminal domain 32 69 IPR013210 -
Sebi67g00031 431 Pfam Protein kinase domain 183 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi67g00031 431 MobiDBLite consensus disorder prediction 407 431 - -
Sebi67g00031 431 Gene3D Ribonuclease Inhibitor 27 142 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi67g00031 Sebi-Chr67 1392980 1395928 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi67g00031 99 427 Receptor kinase-like Gene Family AT5G58300 58.640 9.45e-139 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sebi67g00031 Pkinase 4.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi67g00031 - - gmx:100818444 563.918