Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi67g00003 ATGGGTGTAGGGGACTACTACAAGATCCTGAGGGTGAACCGTAATGCCACAGATGAGGAGCTGAAAAAGGCATATAAGAGGTTAGCCATGAAGTGGCACCCAGATAAGAACCATCAACAACACCAAGTCAAGAAAGAAGAAGCTGAGGCCAAATTCAAGCAGATTTCAGAGGCCTATGATGTCCTTAGCGATGCAAAGAAGCGCCAGATCTATGATTTCTATGGCCACTATCCCCTTAACTCTATGAAGATGAACAAGGAAAATGGTGATGGGGATGTTAAGATTCCCAAGGACGAGAAATTTGGGGTTGTTGAAAGCAAATTGGTGTGTACCCTTGAGGAACTTTACAAAGGTTGTAGAAGGAAATTGAAGATCTCAAGGGCTGTTCCTGATGAATTCGGTAATTTGAAAACTGTGGAAGAAATCTTGAAGATAGATATTAAACCTGGTTGGAAGAAGGGCACTAAAATAACATTCCCAGGTAAAGGAAACCAAGAAGCAGGAAGTGCTGCTTCTGATCTAATCTTTGTGGTTGATGAGAAACCTCATGCTCTATTCAAGAGGGATGGAAATGATTTGGTGGTCACACAAAAAATCTTGTTACTAGAGGCTCTCACTGGAAAGAGTCTTCACTTGACAACATTAGATGGAAGAGAGCTCACAATTCAAGTGACAGATGTTGTGCATCCAGGATATGTGTTTGTGGTCCCAAATGAAGGAATGCCCAATTCAAAGGAACCAGGGAAGAAAGGAAATTTGAAAATCAAGTTTGATCTTATGTTCCCACCAAGGCTTACCACACAACAGAAGTATGAGCTGAAAAGGATTCTCAACAATACTGAAAGTTAA 849 0.4122 MGVGDYYKILRVNRNATDEELKKAYKRLAMKWHPDKNHQQHQVKKEEAEAKFKQISEAYDVLSDAKKRQIYDFYGHYPLNSMKMNKENGDGDVKIPKDEKFGVVESKLVCTLEELYKGCRRKLKISRAVPDEFGNLKTVEEILKIDIKPGWKKGTKITFPGKGNQEAGSAASDLIFVVDEKPHALFKRDGNDLVVTQKILLLEALTGKSLHLTTLDGRELTIQVTDVVHPGYVFVVPNEGMPNSKEPGKKGNLKIKFDLMFPPRLTTQQKYELKRILNNTES 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi67g00003 282 SMART dnaj_3 4 67 IPR001623 -
Sebi67g00003 282 SUPERFAMILY HSP40/DnaJ peptide-binding domain 186 270 IPR008971 GO:0006457|GO:0051082
Sebi67g00003 282 ProSiteProfiles dnaJ domain profile. 5 75 IPR001623 -
Sebi67g00003 282 CDD DnaJ 5 64 IPR001623 -
Sebi67g00003 282 Pfam DnaJ C terminal domain 104 262 IPR002939 -
Sebi67g00003 282 Gene3D - 183 262 - -
Sebi67g00003 282 FunFam DnaJ subfamily B member 13 183 263 - -
Sebi67g00003 282 SUPERFAMILY Chaperone J-domain 3 82 IPR036869 -
Sebi67g00003 282 Gene3D - 107 181 - -
Sebi67g00003 282 Coils Coil 38 65 - -
Sebi67g00003 282 FunFam Dnaj homolog subfamily b member 100 181 - -
Sebi67g00003 282 FunFam DnaJ-like subfamily B member 13 2 96 - -
Sebi67g00003 282 Gene3D DnaJ domain 4 106 IPR036869 -
Sebi67g00003 282 PRINTS DnaJ domain signature 67 86 IPR001623 -
Sebi67g00003 282 PRINTS DnaJ domain signature 25 40 IPR001623 -
Sebi67g00003 282 PRINTS DnaJ domain signature 47 67 IPR001623 -
Sebi67g00003 282 PRINTS DnaJ domain signature 7 25 IPR001623 -
Sebi67g00003 282 SUPERFAMILY HSP40/DnaJ peptide-binding domain 106 183 IPR008971 GO:0006457|GO:0051082
Sebi67g00003 282 CDD DnaJ_C 104 265 - -
Sebi67g00003 282 Pfam DnaJ domain 5 72 IPR001623 -
Sebi67g00003 282 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 277 - -
Sebi67g00003 282 ProSitePatterns Nt-dnaJ domain signature. 52 71 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi67g00003 Sebi-Chr67 95473 97204 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi67g00003 6 74 C2H2 Transcription Factor Family AT1G74250 36.232 6.84e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi67g00003 K09510 - gmx:100786068 473.011