Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi679g00011 ATGAAAGCTGCCATTGGCATGAGAAGCTCTTCAAGACGCAAAGGTGTCAAGGGTGAACAACCTGGTCTAGTTCTCTCATGGGCTCAAAGAGTTAAAATTGTTGTTGGTGCAGCTAGAGGACTTGAATATCTTCATGAAAAGGCAGAGACTCATATTATCCGTTGTTACATTAAGTCTAGTAACATAATGTTTTTCGATGATGATGTTGTAAAGATTGCAGATTTTGATTTGTCAAATCAAGCCCCTGATGCAGCAGCACGACTTCATTCTACTCGTGTTCTTGGAACCTTTGGTTATCATGCTCCAGAGTAA 312 0.4038 MKAAIGMRSSSRRKGVKGEQPGLVLSWAQRVKIVVGAARGLEYLHEKAETHIIRCYIKSSNIMFFDDDVVKIADFDLSNQAPDAAARLHSTRVLGTFGYHAPE 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi679g00011 103 Pfam Protein kinase domain 27 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi679g00011 103 SUPERFAMILY Protein kinase-like (PK-like) 21 103 IPR011009 -
Sebi679g00011 103 Gene3D Transferase(Phosphotransferase) domain 1 10 103 - -
Sebi679g00011 103 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 13 103 - -
Sebi679g00011 103 ProSiteProfiles Protein kinase domain profile. 1 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi679g00011 Sebi-Chr679 215726 216152 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi679g00011 24 103 Trihelix Transcription Factor Family AT1G68690 53.750 3.45e-20 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Sebi679g00011 Pkinase 9.9e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi679g00011 K13436 - gmx:547595 166.007