Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi678g00024 ATGGATCTTCAACTGTTCTTGGGAAGCACCAATAGCTTACACAAAGTTCCCTTCCGCCGTGGAACTTCTCAAAATTCTCTTGGACAATCTTCACAAAAGCTGCAGCTTTGTGTATCAGGCCCCGTGAGGAGCTCTAATACCAGATATGGTGAGCAATTGAGGAGGGTGAAGGAGGCATTGCACTTGTCCACTGCACCGTCTACTGTCGTTTGCCGTGAGGAGGAGCAGAATGTGGTTTTGGGGTTTTGTAAAAGGTGCATTGAGCACGAGAAAGCTGGGAGTCTCTACATATGTGGGTGTCCTGGAACCGGGAAATCATTATCTATGGAGAAAGTGAAAGAGCTTTTGGTCAACTGGGCTACTGAGGTATGCTCTACTTATTGGTTTCGTGCTCTTGTTAATGTCCTCTGGTTTCTGGTGGCAGGTTTCCCATTGCCAGATGTTGTATCTGTAAATTGTACATCCCTGGCCAGTACATCTGATATTTTCACTAAGATACTTGGGTTAAACAAAGCACTAGGAAAAAAGGTTTCAGGCACACCCTTACAGCAACTTCAGAACATATACTCTCAGAAATTGTCTGTCAAGAACATGATATTGATTGTAGCTGATGAATTAGATTATCTAATAACCAAAGACAGAGGTGTCCTCCATGATCTTTTCATGCTTACCACTCTCCCATTTTCCAGATGTATATTAATAGGTGTAGCTAATGCAATTGACCTAGCTGATCGAATTCTTCCAAGGCTTACGTCATTGAATTGCAAGCCTATTGTTGTAAACTTTCAGGCATACTCTAAAGATCAGATCCTTAGGATTCTTGAAGAAAGGCTAAAAGGACTTCCTTACATTGTCTTCCAACATCAAGCGCTGGAACTATGTGCCAGGAAAGTTGCTGCAGCTTCTAGAGACATGCGAAATGCTCTTTGTATATGCAGGAGTGCAATAGAGATGCTAGAAGCGGAAATTAGAGAATCTGCCTCCAACTTGAATACTTCATTGGAAGAAAAATCATCATCCAAACAAAACGTTGCTACATCTCCTGTTTTTGTAAAAAAGCAAGAATTTGATATCGTAAGGATTAATCATATGGCTCTTGCCTTGTCAAAAACATATAGATCACCGGTGGTGGATACAATACAATCTCTGCCACATCATCAACAGATTATACTCTGCTCTTCTATGAAACATTTCCGTGGAGCCAAGAAAGATGCAATCCTAGGGGAGTTGTATAAATCTTATGTGGAGATGTGCAAATCATCACTAATTCCCCCTGCAGGAATCTTAGAGTTTTCAAACATTTGCAGAGTGCTGAACGATCAGGGGCTTATTAAACTAGGACAATCCCGAGAGGATAAATTGAGAAGAGTGACACCTAAAGTAGATGAGAGTGATATTACTTTTGCATTGTAG 1413 0.4119 MDLQLFLGSTNSLHKVPFRRGTSQNSLGQSSQKLQLCVSGPVRSSNTRYGEQLRRVKEALHLSTAPSTVVCREEEQNVVLGFCKRCIEHEKAGSLYICGCPGTGKSLSMEKVKELLVNWATEVCSTYWFRALVNVLWFLVAGFPLPDVVSVNCTSLASTSDIFTKILGLNKALGKKVSGTPLQQLQNIYSQKLSVKNMILIVADELDYLITKDRGVLHDLFMLTTLPFSRCILIGVANAIDLADRILPRLTSLNCKPIVVNFQAYSKDQILRILEERLKGLPYIVFQHQALELCARKVAAASRDMRNALCICRSAIEMLEAEIRESASNLNTSLEEKSSSKQNVATSPVFVKKQEFDIVRINHMALALSKTYRSPVVDTIQSLPHHQQIILCSSMKHFRGAKKDAILGELYKSYVEMCKSSLIPPAGILEFSNICRVLNDQGLIKLGQSREDKLRRVTPKVDESDITFAL 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi678g00024 470 PIRSF Cdc6 11 470 IPR016314 GO:0006270|GO:0051301
Sebi678g00024 470 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 325 IPR027417 -
Sebi678g00024 470 SUPERFAMILY "Winged helix" DNA-binding domain 376 470 IPR036390 -
Sebi678g00024 470 FunFam Cell division control protein 50 253 - -
Sebi678g00024 470 CDD Cdc6_C 384 466 IPR015163 -
Sebi678g00024 470 Gene3D - 381 466 IPR036388 -
Sebi678g00024 470 Pfam CDC6, C terminal winged helix domain 391 469 IPR015163 -
Sebi678g00024 470 Gene3D - 256 380 - -
Sebi678g00024 470 FunFam Cell division control protein 254 380 - -
Sebi678g00024 470 Coils Coil 316 336 - -
Sebi678g00024 470 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 36 470 - -
Sebi678g00024 470 Gene3D - 50 255 IPR027417 -
Sebi678g00024 470 FunFam Cell division control protein 383 470 - -
Sebi678g00024 470 Pfam AAA domain 90 223 IPR003593 GO:0016887
Sebi678g00024 470 SMART Cdc6_C_2 391 470 IPR015163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi678g00024 Sebi-Chr678 394050 399045 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi678g00024 46 470 Core DNA Replication Machinery Family AT2G29680 60.839 6.59e-179 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi678g00024 K02213 - gmx:100791200 672.159