Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi678g00022 ATGATGTCAAGATCGTATACTAACCTTTTAGATTTGGCTTCTGGGAATTTCCCGGCAATGGGGAGGGAGTCTAAGGAAAGAAGGCGGATGCCAAGGGTTATGAGTGTACCTGGGTTTGTCACAGAGCTGGATGATGACCAGGCAGTTAGTGTTTCTTCTGATAATCCGTCAACAATTTCCACAGATCGAATGATCATTGTGGCAAACCAGCTACCTTTAAAAGCAAAACGAAGAGAGGACAACAAAGGGTGGAGTTTCAGTTGGAATGAGGATTCCTTGCTTTTACAGCTTAAGGATGGATTTCCGGAAGATATGGAGGTTCTTTATGTTGGATCTTTGCGTGTTGACATTGATCCGGCTGAACAGGATGACGTATCACAGTATTTATTGGAAAAGTTTAAGTGTGTCCCTACTTTTTTGCCCCCTGATGTTTTGGCAAAATTTTATGATGGCTTCTGTAAAAGGCAGTTATGGCCACTTTTTCATTACATGTTACCCTTTTCAACAGATAAAAGCCACCGTTTTGATCGCACTTTGTGGGAAGCCTATGTGCTGGCAAATAAACTATTCTTTCAAAAGGTAGTTGAAATAATAAACCCAGAGGATGATTATATTTGGGTTCATGATTATCATTTGATGGTGCTGCCGACATTTATAAGAAGGCGTTTTAACAGGGTTAAAATGGGATTTTTCCTGCATAGCCCCTTTCCGTCATCAGAGATATATAGGACTCTTCCTGTGAGGGAAGAGATACTGAAAGCTTTACTAAACTCTGATATCATTGGATTCCATACCTTTGACTATGCCCGTCATTTCCTTTCCTGTTGCAGTCGAATGTTGGGTCTTGAGTATCAGTCAAAGAGGGGCTATCTAGGATTGGAATATTATGGAAGGACTATCAGTATTAAGATCATGCCTGTTGGGATTCACATGGGTCGTATTGAATCAGTTATGAGAACAGCGGATGAGGAGTGTAAGGTAAGGGAGCTCAAACAGCAATTCGAAGGAAAAACCATCTTGCTTGGTGTTGATGATACGGACATTTTTAAAGGCATAAATCTGAAAATTTTGGCGATGGAGCAGATGCTCAGACAACACCCCAAATGGCAAGGAAGAGCTGTTCTGGTCCAGATAGTAAATCCTGCTAGAGGTAAAGGGATACATCTAGAGGAGATACGTGCTGAAATACAAGAAAGCTGCAGCAGGATCAACAGAGTGTTTGGACGACCTGGTTATGAGCCTATTGTTTTTATTGATAGATCAGTTCCATTTACTGAAAAAGTTGCCTATTACAGCATTGCTGAGTGTGTTATTGTCACAGCTGTAAGGGATGGGATGAACCTAACTCCTTATGAATATATTGCTTGTCGACAAGGAATATCTGGTTCTGAATCATGTTCCAATGTTAGTGACCCAAAAAAGAGCATGCTAGTAATATCAGAATTCATTGGCTGTTCTCCATCTCTTAGTGGGGCTATCCGTGTCAATCCATGGAATGTTGAAGCAACTGCAGAGGCAATGAATGAGGCCATCTCAATGGGTGATGGAGAGAAACAGTTGCGGCATGAAAAGCATTACCGGTATGTCAGCACTCATAATGTGGCTTACTGGTCACGCAGTTTCTTGCAAGACATGGAGAGGGCTTGCACAGACCTTCTTAGGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGATTTAGAGTTGTGGCACTTGACCCTAACTTTAAAAAGCTCTCAATTGATGCTATGGTTTCAGCTTACAAGAGGGCAAAGAGTAGGGCCATTTTATTGGACTATGATGGTACTGTGATGCCACAGAACTCCATTAATAAGAGTCCAAGCAAGGAGGTCATCTCTATTTTAAAAACACTCTGTGCAGACTCCAGAAATGTAGTTTTCATTGTTAGTGGACGGGGGAGGAATAGCTTAAGTGAATGGTTTATTCCCTGCAAAAAACTTGGAATTGCTGCAGAACATGGATGGTCCCAGAGTGGAGAATGGGAAATTTGTGGTAAGTGCTCCGAATTTGGATGGATGCAGATTGCTGAACCCGTAATGAAACTATATACAGAGGCAACTGATGGTTCCTCCATTGAACGTAAGGAAAGTGCTTTGGTTTGGCAATACCGGGATGCAGACCTTGGTTTTGGGTCTGCTCAGGCTAAGGAAATGTTAGATCATCTAGAAAGTGTTTTGGCCAATGAGCCTGTTGCTGCGAAGAGTGGCCAGTTTATTGTTGAAGTGAAGCCTCAGGATGTGAGCAAAGGCTTAGTTGCTGAAAAGATATTTTCGTCAATGGCTGAAAATGGCAATCAGGCTGACTTTGTGCTGTGTGTTGGTGATGACAGATCAGATGAGGACATGTTTGAAATAGTTAGCAGTGCAATCTCGAGAAATATTCTTTCCACCAATGCTTCTGTATTTGCTTGCACGGTTGGACAAAAACCCAGCAAAGCTAAGTATTATCTGGATGATACAACTGAAGTAATAAGCATGCTAGAATCATTGGCCGAAGAATCAGATTCTTCACCATGCATAGAAGAAAGTGGGGATTCCTCTTGA 2562 0.4184 MMSRSYTNLLDLASGNFPAMGRESKERRRMPRVMSVPGFVTELDDDQAVSVSSDNPSTISTDRMIIVANQLPLKAKRREDNKGWSFSWNEDSLLLQLKDGFPEDMEVLYVGSLRVDIDPAEQDDVSQYLLEKFKCVPTFLPPDVLAKFYDGFCKRQLWPLFHYMLPFSTDKSHRFDRTLWEAYVLANKLFFQKVVEIINPEDDYIWVHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIHMGRIESVMRTADEECKVRELKQQFEGKTILLGVDDTDIFKGINLKILAMEQMLRQHPKWQGRAVLVQIVNPARGKGIHLEEIRAEIQESCSRINRVFGRPGYEPIVFIDRSVPFTEKVAYYSIAECVIVTAVRDGMNLTPYEYIACRQGISGSESCSNVSDPKKSMLVISEFIGCSPSLSGAIRVNPWNVEATAEAMNEAISMGDGEKQLRHEKHYRYVSTHNVAYWSRSFLQDMERACTDLLRKRCWGIGLSFGFRVVALDPNFKKLSIDAMVSAYKRAKSRAILLDYDGTVMPQNSINKSPSKEVISILKTLCADSRNVVFIVSGRGRNSLSEWFIPCKKLGIAAEHGWSQSGEWEICGKCSEFGWMQIAEPVMKLYTEATDGSSIERKESALVWQYRDADLGFGSAQAKEMLDHLESVLANEPVAAKSGQFIVEVKPQDVSKGLVAEKIFSSMAENGNQADFVLCVGDDRSDEDMFEIVSSAISRNILSTNASVFACTVGQKPSKAKYYLDDTTEVISMLESLAEESDSSPCIEESGDSS 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi678g00022 853 CDD HAD_TPP 594 829 - -
Sebi678g00022 853 SUPERFAMILY HAD-like 593 837 IPR036412 -
Sebi678g00022 853 NCBIfam trehalose-phosphatase 590 837 IPR003337 GO:0003824|GO:0005992
Sebi678g00022 853 FunFam Alpha,alpha-trehalose-phosphate synthase 317 530 - -
Sebi678g00022 853 Gene3D Glycogen Phosphorylase B; 317 530 - -
Sebi678g00022 853 NCBIfam HAD-IIB family hydrolase 595 795 IPR006379 -
Sebi678g00022 853 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 592 705 - -
Sebi678g00022 853 Pfam Trehalose-phosphatase 596 826 IPR003337 GO:0003824|GO:0005992
Sebi678g00022 853 Gene3D Glycogen Phosphorylase B; 56 316 - -
Sebi678g00022 853 CDD GT20_TPS 63 546 IPR001830 GO:0003824|GO:0005992
Sebi678g00022 853 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 31 838 IPR001830 GO:0003824|GO:0005992
Sebi678g00022 853 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 56 315 - -
Sebi678g00022 853 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 718 849 - -
Sebi678g00022 853 Gene3D - 592 683 IPR023214 -
Sebi678g00022 853 Gene3D - 717 846 IPR023214 -
Sebi678g00022 853 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 550 - -
Sebi678g00022 853 Pfam Glycosyltransferase family 20 63 546 IPR001830 GO:0003824|GO:0005992
Sebi678g00022 853 FunFam Trehalose-6-phosphate synthase 2 672 751 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi678g00022 Sebi-Chr678 383045 387095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi678g00022 1 843 Trehalose Biosynthesis Gene Families AT1G06410 77.804 0.0 1376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi678g00022 K16055 - gmx:100800847 1615.51