Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi678g00011 ATGAGGGAAATCAAGGTGCAGAAGCTTGTCCTCAACATCTCCGTCGGTGAGAGTGGAGATCGTCTCACCAGAGCCGCCAAGGTGCTTGAGCAGCTCAGTGGCCAAACCCCAGTGTTTTCTAAAGCAAGATACACTGTTCGTTCCTTTGGGATTAGAAGAAATGAGAAGATTGCATGCTATGTCACTGTTAGAGGTGACAAGGCAATGCAACTTTTGGAGAGTGGTTTGAAGGTGAAGGAATATGAACTTCTCAGAAGGAACTTCAGTGATACCGGGTGTTTCGGCTTTGGTATTCAGGAGCACATTGATTTGGGAATTAAGTATGATCCTTCAACCGGTATTTATGGAATGGATTTCTATGTTGTTCTGGAGCGCCCTGGCTATCGTGTGGGACGTCGCCGTAGGTGCAAGTCCACTGTTGGATTCAACACCGTGTCACTAAGGAGGATTCTATGA 456 0.4671 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKSTVGFNTVSLRRIL 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi678g00011 151 Pfam Ribosomal protein L5 1 52 IPR031310 -
Sebi678g00011 151 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 1 143 IPR002132 GO:0003735|GO:0005840|GO:0006412
Sebi678g00011 151 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 1 146 IPR002132 GO:0003735|GO:0005840|GO:0006412
Sebi678g00011 151 Pfam ribosomal L5P family C-terminus 56 134 IPR031309 -
Sebi678g00011 151 SUPERFAMILY RL5-like 1 141 IPR022803 -
Sebi678g00011 151 ProSitePatterns Ribosomal protein L5 signature. 29 45 IPR020929 GO:0003735|GO:0005840|GO:0006412
Sebi678g00011 151 FunFam 60S ribosomal protein L11 1 148 - -
Sebi678g00011 151 Gene3D - 1 149 IPR022803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi678g00011 Sebi-Chr678 204495 206392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi678g00011 1 143 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 94.406 1.68e-98 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi678g00011 K02868 - pop:7485259 268.47