Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi677g00010 ATGGAAGGGAAGGAGCAAGATGTTTCATTGGGAGCTAACAAATTCCCTGAGAGGCAACCCATTGGGACAGCGGCTCAGAGCCAAGACGATGGAAAGGACTACAAGGAACCACCTCCAGCACCACTGTTTGAGCCCTCCGAGCTCACATCATGGTCGTTCTACAGAGCTGGGATAGCAGAGTTCATGGCCACTTTTCTGTTCCTCTACATCACTATCTTGACGGTTATGGGCGTTAACAGATCCCCTACCAAGTGCCAATCTGTTGGGGGTCACATTAACCCGGCTGTGACATTCGGTCTGTTTTTGGCGAGGAAATTGTCGTTGACCAGGGCTCTGTTCTACATGGTGATGCAAGTCCTTGGTGCTATCTGTGGTGCTGGTGTGGTCAAGGGTTTCGAGGGAAAGACCTTGTATGGAAAATACAACGGTGGTGCTAACTTCGTCGCCCCTGGTTACACCAAAGGTGACGGACTTGGTGCTGAGATTGTTGGCACCTTCATTCTTGTCTACACCGTTTTCTCAGCCACAGATGCCAAGCGTAGTGCCAGAGACTCTCACGTCCCTATTTTGGCACCCTTGCCAATTGGATTCGCTGTGTTCTTGGTTCACTTGGCCACTATCCCAATCACTGGAACCGGTATTAACCCTGCTAGAAGTCTCGGTGCTGCCATTATCTTCAACAAAGACCTTGGCTGGGATGATCACTGGATTTTCTGGGTTGGACCTTTCATTGGAGCAGCTCTTGCAGCGCTTTACCACCAAGTTGTGATCAGAGCCATTCCTTTCAAATCCAGTTAA 798 0.4987 MEGKEQDVSLGANKFPERQPIGTAAQSQDDGKDYKEPPPAPLFEPSELTSWSFYRAGIAEFMATFLFLYITILTVMGVNRSPTKCQSVGGHINPAVTFGLFLARKLSLTRALFYMVMQVLGAICGAGVVKGFEGKTLYGKYNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDLGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKSS 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi677g00010 265 ProSitePatterns MIP family signature. 91 99 IPR022357 -
Sebi677g00010 265 Gene3D Glycerol uptake facilitator protein. 40 264 IPR023271 -
Sebi677g00010 265 PRINTS Major intrinsic protein family signature 196 218 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi677g00010 265 PRINTS Major intrinsic protein family signature 236 256 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi677g00010 265 PRINTS Major intrinsic protein family signature 160 178 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi677g00010 265 PRINTS Major intrinsic protein family signature 110 129 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi677g00010 265 PRINTS Major intrinsic protein family signature 73 97 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi677g00010 265 MobiDBLite consensus disorder prediction 1 39 - -
Sebi677g00010 265 Pfam Major intrinsic protein 47 84 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi677g00010 265 Pfam Major intrinsic protein 89 253 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi677g00010 265 NCBIfam MIP family channel protein 89 253 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi677g00010 265 SUPERFAMILY Aquaporin-like 47 258 IPR023271 -
Sebi677g00010 265 FunFam Putative aquaporin PIP-type 7a 129 261 - -
Sebi677g00010 265 CDD MIP 55 256 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi677g00010 265 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 89 261 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi677g00010 Sebi-Chr677 127317 128481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi677g00010 1 265 Major Intrinsic Protein MIP AT4G23400 78.547 2.26e-151 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi677g00010 K09872 - gmx:100791447 499.204