Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi677g00007 ATGGATGAGGACATGTCAGGCTTTTGCATTAGAAGTGGAAGTGTTCGTGGTAACAATAGTGCAAGTACCGGCACTAAGTGTGGGCGTTGGAACCCCACAACTGAACAAGTTAAGCTTTTAACTGAACTGTTCAGTTCTGGACTCTGTACTCCAAGCACTGATCAGATTCAAAAGATCTCTACTCAGTTGAGTTTTTATGGTAAGATTGAGAGCAAGAATGTCTTCTATTGGTGTCAGAATCATAAGGCTAGGGAAAGACAAAAACGTCGTAAGGTTTCCTTTGATGATAATAAGGATGTGATTCGTAGAGAAAATTCCAACTCCAAGTCCATCAATTCTTCTTCACAAAATTTTGCAAAGCTCTATCAGGTTTCAGAGCCAGAGAGGGTGATTGAGACTCTTCAACTCTTCCCTTTGAACTCCTTTGGTGAATCAGAATCAAAGAATTTTAGAGTCCATGCAAATGAATGCAGGGATAATACAATATTTTCATACACAATGGGGGAACAAATGGATCACCCTCCATTAGATCTTCGCTTGAGTTTTCTGTGA 552 0.3986 MDEDMSGFCIRSGSVRGNNSASTGTKCGRWNPTTEQVKLLTELFSSGLCTPSTDQIQKISTQLSFYGKIESKNVFYWCQNHKARERQKRRKVSFDDNKDVIRRENSNSKSINSSSQNFAKLYQVSEPERVIETLQLFPLNSFGESESKNFRVHANECRDNTIFSYTMGEQMDHPPLDLRLSFL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi677g00007 183 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 14 110 IPR044555 GO:0003700|GO:0099402
Sebi677g00007 183 Pfam Homeodomain 27 87 IPR001356 GO:0003677
Sebi677g00007 183 Gene3D - 26 94 - -
Sebi677g00007 183 ProSiteProfiles 'Homeobox' domain profile. 23 88 IPR001356 GO:0003677
Sebi677g00007 183 SUPERFAMILY Homeodomain-like 28 90 IPR009057 -
Sebi677g00007 183 FunFam WUSCHEL-related homeobox 11 26 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi677g00007 Sebi-Chr677 107482 108474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi677g00007 8 183 Wox Gene Family AT3G11260 55.851 2.09e-61 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Sebi677g00007 Homeodomain 1.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi677g00007 - - pvu:PHAVU_008G226100g 283.108