Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi676g00036 ATGGAAGTTACGGCTACATCTAACACACCAACAGCTGCATCCATGATTCTAGAGGATAAAGGAAGATTCAAAATGATCATGACTAAACTTAACATGCCTGGCGTGGATGCCGTTTCTTTTGTGCACTTAGTGCTTGGAAAACGCATTCCTGTGATATTCATGTACTCTGGAGGATTTGATGATGTGACGGATGAGAAAGCGTTAGCTTCAGAATCCTGTTACTTCATTGAGGAACCGATCATGTTATGCGATTTAAAATGTATATTGCAGGACATGTATCAATCGTCAAAATTGATCTATAAAGAATCTCAAGATATTACTGCAGAAGGATCACCACAGCCACAGGCACAGCATGCCAATGACACAGAGGTTGATGGAGAAATTAGAAACCATGGGAAGGGGAAGGGGAAAGTTGATCATAACAAGAAAATGGGAGGTGATTCGTTGGTAGGAGCCAGAGAAGGACTGCATAGAAGCCAAGGTGGTGGGAGAGTTTGTGAGCACTCAACATACCCAACCCGACCACCTTCATGGTTATGGAAGCATTCAGTACCTCAGATGAACTTGTTCAGTCAAAATTTTCGTGACAGTTTATTTGGTGATAAAAAACGTCTTTGGACACCTGAGTTGCATCTCAAGTTTGAAGAAGCCGTGCGTCACTTAGGAGAGAACGCTCGTCCCAAAGCCATATTATATATGATGAATGACGCTTCCCTCACAATCCGTCAGGTTGCTAGCCACTACCAGAAATACAAAAGTCGGATGAAGCATACGGAAAATGACAGCAGGAAATCTGATTCGGGTGCAGTGAAGACCTCATCATGCTCAAGTGTCAAGGCAAAGTTTCGCTCACCACCTGAAGGGTCCAGCACAGGATCAGCACAAG 886 0.4368 MEVTATSNTPTAASMILEDKGRFKMIMTKLNMPGVDAVSFVHLVLGKRIPVIFMYSGGFDDVTDEKALASESCYFIEEPIMLCDLKCILQDMYQSSKLIYKESQDITAEGSPQPQAQHANDTEVDGEIRNHGKGKGKVDHNKKMGGDSLVGAREGLHRSQGGGRVCEHSTYPTRPPSWLWKHSVPQMNLFSQNFRDSLFGDKKRLWTPELHLKFEEAVRHLGENARPKAILYMMNDASLTIRQVASHYQKYKSRMKHTENDSRKSDSGAVKTSSCSSVKAKFRSPPEGSSTGSAQ 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi676g00036 295 ProSiteProfiles Response regulatory domain profile. 1 93 IPR001789 GO:0000160
Sebi676g00036 295 MobiDBLite consensus disorder prediction 104 144 - -
Sebi676g00036 295 FunFam Two-component response regulator 200 259 - -
Sebi676g00036 295 Gene3D - 1 111 - -
Sebi676g00036 295 Pfam Myb-like DNA-binding domain 205 252 IPR001005 -
Sebi676g00036 295 SUPERFAMILY CheY-like 2 97 IPR011006 -
Sebi676g00036 295 NCBIfam myb-like DNA-binding domain, SHAQKYF class 202 254 IPR006447 GO:0003677
Sebi676g00036 295 MobiDBLite consensus disorder prediction 122 144 - -
Sebi676g00036 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 202 256 IPR017930 -
Sebi676g00036 295 MobiDBLite consensus disorder prediction 252 295 - -
Sebi676g00036 295 SUPERFAMILY Homeodomain-like 202 257 IPR009057 -
Sebi676g00036 295 MobiDBLite consensus disorder prediction 267 295 - -
Sebi676g00036 295 Gene3D - 201 258 - -
Sebi676g00036 295 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 204 270 IPR044841 GO:0003700|GO:0006355
Sebi676g00036 295 MobiDBLite consensus disorder prediction 252 266 - -
Sebi676g00036 295 MobiDBLite consensus disorder prediction 104 120 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi676g00036 12 266 Response Regulator Gene Family AT1G68210 27.941 5.10e-18 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi676g00036 Myb_DNA-binding 2.3e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi676g00036 - - ccaj:109795563 163.696