Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi676g00033 ATGGAGAAAGTTTGTGAATTCTGCACAGCTTTGAGGCCGCTTGTTTACTGTAAGGCTGATGCAGCATATCTTTGTCTATCCTGTGATGCAAAGGTCCATTTGGCAAATGCATTGTCTGGTCGCCACCTCAGGACTCTTGTGTGTAACTCATGCAGATATCGATTTGCTTATGTTCAGTGCTTGGACCACAAAATGTTAATCTGTCGAGACTGTGATCAAAAGCTGCACACTGTTTCTTTACCACATCAGAAACGAGCTATCAGAACTTTCATGGGCTGCCCTTCTGCCAAAGACTTTGCAACACTCTGGGGTTTTGAATTGAATGAGATTGAAAGCAGTGTCAATCAGGATCAGTTTGCATCTACTTCTTGTGTTTCTTCAAATTTGAATGTGGTAAAAGTCTCAGGAGGAAAGTCTGGCATACAAACTGGGGTCCTTTCAATGGTATCTAAGGTCAAACTTGATGGGGGATCGGGTAGTCAACAAGGCCAGATATTGTACTGTGATCAAGAGAGACAAATTATTCTGCAGCAGATTGTTGATTTAAAGCAATTTCAGCTAAATGAGGAGAGTGATCATTCTACAAAGATAAATGGGTTACAAGAAAAAGACTTATCTCCTTCAGTATATCATACTCTTAAGAAATTGGATGAAAAATTCAATCAGCAAGCACAAAACTCCCAGGATCTTGCTACTAATCTTCTGGAAGAAGACAGTCCCATTGTGGAGCAGAATCCCGAAACTTTCTCTTCTGCGTTTTCTCAACTTGATAATTTGTCTTCATCTTCAGTTATAGACCTTCCCTTGCATGGAGAATTGTTTTGGTCATGCAAAAGTCCACTTAAAAGTAATCAGTTGTGGTCTCAAAACATTCAAGACCTTGGGATATGTGAAGAACTTATTTGCCAAGATGATTTTAACATACCTGATGTTGACTTAACATTCCAAAACTTTGAGGAACTATTTGGTGGAGATCAAGATCCAATTAGAGTAATGCTTGGTGATAAAGATGTCTCCTGCTCTTCTTTAAAGAAAGACATGTCGGTTGATAAGTCAGATATTGACAATCCAAGTGTAATGGAGGATTCTTTGGCAGCTGCATCCATTACTATCTCCCAATCTCATCGTGAGACCAAGGATATGGATCCTCTCAACCAGTACAGTCCAAGAAGTATGGATCATGCTCATGCAATTCAACCATTTGAATCAACTATATCATTCTCCGTTTTGAGATTCAGTGCTGAAAGTAGTCACACTGATCATGATGACAGTGCTCTTTTTCCCTAG 1287 0.3963 MEKVCEFCTALRPLVYCKADAAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYRFAYVQCLDHKMLICRDCDQKLHTVSLPHQKRAIRTFMGCPSAKDFATLWGFELNEIESSVNQDQFASTSCVSSNLNVVKVSGGKSGIQTGVLSMVSKVKLDGGSGSQQGQILYCDQERQIILQQIVDLKQFQLNEESDHSTKINGLQEKDLSPSVYHTLKKLDEKFNQQAQNSQDLATNLLEEDSPIVEQNPETFSSAFSQLDNLSSSSVIDLPLHGELFWSCKSPLKSNQLWSQNIQDLGICEELICQDDFNIPDVDLTFQNFEELFGGDQDPIRVMLGDKDVSCSSLKKDMSVDKSDIDNPSVMEDSLAAASITISQSHRETKDMDPLNQYSPRSMDHAHAIQPFESTISFSVLRFSAESSHTDHDDSALFP 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi676g00033 428 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Sebi676g00033 428 CDD Bbox1_BBX-like 4 47 - -
Sebi676g00033 428 SMART bboxneu5 1 47 IPR000315 GO:0008270
Sebi676g00033 428 SMART bboxneu5 48 87 IPR000315 GO:0008270
Sebi676g00033 428 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi676g00033 Sebi-Chr676 499742 503513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi676g00033 1 329 C2C2-CO-like Transcription Factor Family AT1G68190 40.663 4.45e-72 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi676g00033 - - gmx:100819787 686.797