Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi676g00024 ATGGGAATGGAGCCAGAGAATCACAAAATGAAGGCACTGAACCTGCTTCGAAGCAGAATCTGCGACCCCAAATTCATATTCAAGGATTCTCCAGAAGGCAATTACAGCAAGCTGAAATTCATGATATCAAGTTCAGTGACTGAAGCATGCAACAATTCTATTCTGCTTCTCGGTCCCCGTGGCTCCGGGAAGGTTGCGGTTTTGGAGCTTGTCATTCAAGATTTGTTGCTACAATATCCGGACTCAATTTCAGTGATCAGGTTGAATGGGCTTTTACATAGTGATGATATCTCTGCATTCAAGGAAATAGCTAGGCAGTTATGCATGGAGCATCAATTGCTATTCTCAAAAGCGGCATCATTTGATGACAACTCCCAATTTATGGTAGCCGTGCTAAAGGAATGCGGATTAGCACATAAAACAGTACTTTTTATTCTGGATGAGTTTGACCTCTTTGCTCAGGGTAAACAGCGGCTACTTTATAGCTTGCTAGATGCAATGCAATCAGTAACATCACAGGCTGTTGTACTTGGCATTAGTTGCCGCCTGGATGCAGATCAGCTATTGGAGAAAAGAGTACGATCTCGATTTTCACATAGAAAGATGTTGTTCTTACCACCTTCAATGGAGGACTCACAAAGATTACTGGTGCATATGCTGACGTTACCAATAGATTCAAGTTTTCCACATGATTATGTTGTTGAATTTAACAGAAAGATCCAAAATATTATAGAAGACAGAAGGTTCAAAGAAATCTTCAATAAATATTTAAATTTTGATTCCTCTGTTAAACATTTGCTGAGGTTCCTATTCTGTGCAGTCTCTCATATGGATTTGCAGACTGGGCTTCTGTCCGTGGAGAACTTTGAAAGTGCATTTTCAAGTATCCAGAGGCAGCCCAAGCTGGAATGTTTAAAAAATTGCTCCATTTTAGAACTTTATATTTTGGTTTGCATGAAGAGATTGGAAGTTAAAGAGCAGATTTTATGCAACTTCAATTCTGTAATGAAAGAGTACAAAAGTATACATGATTCTTTCCAGACTTCTGATTATTATGCACGAAATGTCTGCTTGAGGGCATTTGAACACCTTATACATCGTGAATTAATATGCTTCACAGACAATAGAGGACATAGTTTGTCTGTTGAATTCCGTCCTGTAAAGCTTTTAATTTCATCTGCGGAACTACATCAGGGACTAAGAGCATATCATTGTTGCCCTAAACTTCCATCACTAAAACTTCTCTTCTCGGAACTAACATTTCTCTCTTTGCTTCCTTGCCTCAACACACATATAGTAGCAAATACTAACAAGGGAAACCTTAGCAACAACAATGTACTTTTCAGCAAAAGTGAGTCTGAATCAATGTCAACTTCTAGAGGAGGCGTTTGCTTTTTTGTCTTTACTTATACCAACTACCTATGCAACACAAGCACTATGCCTATTTATGTAGCTGACTAA 1461 0.3874 MGMEPENHKMKALNLLRSRICDPKFIFKDSPEGNYSKLKFMISSSVTEACNNSILLLGPRGSGKVAVLELVIQDLLLQYPDSISVIRLNGLLHSDDISAFKEIARQLCMEHQLLFSKAASFDDNSQFMVAVLKECGLAHKTVLFILDEFDLFAQGKQRLLYSLLDAMQSVTSQAVVLGISCRLDADQLLEKRVRSRFSHRKMLFLPPSMEDSQRLLVHMLTLPIDSSFPHDYVVEFNRKIQNIIEDRRFKEIFNKYLNFDSSVKHLLRFLFCAVSHMDLQTGLLSVENFESAFSSIQRQPKLECLKNCSILELYILVCMKRLEVKEQILCNFNSVMKEYKSIHDSFQTSDYYARNVCLRAFEHLIHRELICFTDNRGHSLSVEFRPVKLLISSAELHQGLRAYHCCPKLPSLKLLFSELTFLSLLPCLNTHIVANTNKGNLSNNNVLFSKSESESMSTSRGGVCFFVFTYTNYLCNTSTMPIYVAD 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi676g00024 486 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 215 398 IPR032705 -
Sebi676g00024 486 Pfam ATPase family associated with various cellular activities (AAA) 54 200 IPR003959 GO:0005524|GO:0016887
Sebi676g00024 486 FunFam Origin of replication complex subunit 4 32 206 - -
Sebi676g00024 486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 263 IPR027417 -
Sebi676g00024 486 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 11 408 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Sebi676g00024 486 Gene3D - 32 206 IPR027417 -
Sebi676g00024 486 PIRSF ORC4 4 415 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi676g00024 Sebi-Chr676 311549 327406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi676g00024 3 415 Core DNA Replication Machinery Family AT2G01120 66.430 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi676g00024 K02606 - gmx:100800582 699.508