Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi674g00010 ATGGTCTTGTGTGTTGAGATTAAGGATTTCTATCCAGAAGAAAGAGATGCTTTGTTGCTCATAAGGGATTCTTTAAATTCTTCTCTCAATTTGCATGGGAATTGGACAGGACCTCCTTGTATAGAAAATCAGAGTAGATGGTTTGGTATAACATGTTCCAATTGGCATGTTGTTCACATTGTCCTTCAAGGAGTTAATCTTAATGGTTATTTACCTCCTACATCCTTTCAAAATATAACTTTCTTGAGCCAACTTGACTTCAGAAACAATGCACTTTTTGGGCCACTACCAAACCTCACTAGTTTGGTGTTTTTAGAACAAGTCTTATTCTCATCTAATTATGTGTCAGGGTCAATTCCTGTGGAGTATGTTGAACTTCCCAGGCTACAAGTCTTGGAGCTGCAAGAAAACTACTTAGATAGTCAAATTCCACCCTTTGATCAACCATCATTGACAAGTTTCAATGTGTCATACAATCATCTGGTAGGGTCAATTCCTGAAACTTCTGTGCTTCAAAGGTTCCCAAAGAGTTCTTTTGATAATAATTCAGATCTTTGTGGTAAGCCATTGGATAAGTCATGTCCTGTTGAACCTCCTGCCCCATCTCCAGCTCCATTTCCTGTTGTTGTTCCTCCAAGCCCTGCAGTGGAAAAAATTAAGAAGAGACTTCAAGTATGGGTTATTGCTTTGATTGCTACTTCAGCTGGACTCTTTCTTTTTATGATCATTATTATTGCTTTCTTGTTTTCTAGAAAACAAGCAAGTGGAAAAGCAAAAAGAAGAAATGATTCAGCTGGGTATGTTTTTGGAGCATGGGCAAAGAAGATGGTGTCTTATCCAGGGAAGAGTGATGATTCTGAAAGATTAGGCAGATTGGAATTTTCCAACAAGAAATTTCCAGTTTTTGACATGGATGATTTATTAAGGGCATCAGCAGAAGTGCTAGGAAGAGGGAATTTAGGTGTTACATACAAAGCAACACTTGAAACTGGTACTGTTGTTGCAGTGAAGAGACTTAGCTACATGAATGAATTGAGCAGGAAGGAATTTCTCCATCAGATGCAAATGCTAGAAGAGCAAAAGCTGGTCATATATGAACTAGTCCCTGATGGCACTTTGTTTGAGCTCCTACATGAGGGTGGAGGAGTTGGAAGAACACCTCTTGATTGGACCACAAGACTGGCTATTATCAAAGACATAGCAAAGGGTCTTGCTTTCCTTCATCATTCCTTGTCTTCTCATAAGGTTCCTCATGCCAACCTCAAATCATCCAATGTCCTAATTCATCAAAATAGCCAAGGTTACCATTCCAAGCTCACAGACTATGGCTTCTTGCTTCTACTCCCAGCTAAAAAAGATACAGAAAAGCTAGCCATAAGCAAGTCACCAGAATTTGTTAAAGGAAAGAAGCTGACACACAAAGCTGATGTCTATTGCTTTGGTATCATTATGCTAGAGATTATAACTGGCAAAATTCCTGGTCAAATATTAGGTGAAGTTGAAGAAACAGCCAATGATCTTTCAGATTGGGTAAGAACAGTGGTGAACAATGATTGGTCCACTGATATACTTGATTTAGAAATACTAGCAGAAAAAGAAGGGCATGATGCAATGTTGAATTTGACAGAGTTAGCTCTGGAGTGTACAGATATGACACCAGAGAAGCGGCCTAAAATGAGTGTAGTGTTGAGAAGAATAGAAGAGATAGAGCAAATGAAACCAGAGAATGAATGA 1734 0.3881 MVLCVEIKDFYPEERDALLLIRDSLNSSLNLHGNWTGPPCIENQSRWFGITCSNWHVVHIVLQGVNLNGYLPPTSFQNITFLSQLDFRNNALFGPLPNLTSLVFLEQVLFSSNYVSGSIPVEYVELPRLQVLELQENYLDSQIPPFDQPSLTSFNVSYNHLVGSIPETSVLQRFPKSSFDNNSDLCGKPLDKSCPVEPPAPSPAPFPVVVPPSPAVEKIKKRLQVWVIALIATSAGLFLFMIIIIAFLFSRKQASGKAKRRNDSAGYVFGAWAKKMVSYPGKSDDSERLGRLEFSNKKFPVFDMDDLLRASAEVLGRGNLGVTYKATLETGTVVAVKRLSYMNELSRKEFLHQMQMLEEQKLVIYELVPDGTLFELLHEGGGVGRTPLDWTTRLAIIKDIAKGLAFLHHSLSSHKVPHANLKSSNVLIHQNSQGYHSKLTDYGFLLLLPAKKDTEKLAISKSPEFVKGKKLTHKADVYCFGIIMLEIITGKIPGQILGEVEETANDLSDWVRTVVNNDWSTDILDLEILAEKEGHDAMLNLTELALECTDMTPEKRPKMSVVLRRIEEIEQMKPENE 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi674g00010 577 Pfam Leucine rich repeat N-terminal domain 13 53 IPR013210 -
Sebi674g00010 577 SUPERFAMILY L domain-like 12 176 - -
Sebi674g00010 577 Gene3D Ribonuclease Inhibitor 11 196 IPR032675 -
Sebi674g00010 577 ProSiteProfiles Protein kinase domain profile. 309 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi674g00010 577 SUPERFAMILY Protein kinase-like (PK-like) 313 567 IPR011009 -
Sebi674g00010 577 Gene3D Transferase(Phosphotransferase) domain 1 368 577 - -
Sebi674g00010 577 Gene3D Phosphorylase Kinase; domain 1 278 363 - -
Sebi674g00010 577 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 572 IPR046959 -
Sebi674g00010 577 Pfam Protein tyrosine and serine/threonine kinase 337 564 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi674g00010 Sebi-Chr674 343263 345457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi674g00010 34 570 Receptor kinase-like Gene Family AT1G68400 33.833 8.96e-98 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sebi674g00010 Pkinase 1.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi674g00010 - - gmx:100788386 882.478