Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi66g00132 ATGGATTACACTTGGGATGCTTCCATTGATGAGGAAACATTGGTTAAGATATTGGAGGATTTGTCCTGCTATGAATCTGAGTTGAATGCGAAAGGTGTCTATGCGTCAGTGGTTGAAGAAGATGGCCAGGTTCCTTTTATGGTTCATGATGATTTAAACAATAATGATGATCACGCAAATGGTAGTGACAATAGTGAGCATTGCATTGGTATTAATAGTGAGCAAGACATAAGAAACTTGGATTTAGAGAATTTTAGTCCTCATGATATTAGTAAATATGATTTTGCTAGTATGGATTTAGCTTACCTATTTTATCGGGAATATGGAAAAGCTAATGGTTTTAGTATCCGTAAAGGGAAGATCCTATACAGTAAGAAAACACGGGAAGAATTACAGCAAGAATATTTTTGTTCAAACAATGGTCTCCGTGAAGACAGGGGTCTTAAAATGGAAGATAGGAAACGTGAGCCTAGAGCTGAAACTAGGTGTGAATGTCAAGCAACCTTTCGTGCTCATGTTGACAAAATCACCGGCCGTTGGTATGCCACTGTTTTTAATGATAATCACAATCATGAGCTATTAGGACCAAAATTTTCTGGAATGCTTCCTGGACATAGAAGGATGAGACAAGGTGATGTAGTTCAAATGAACAATATGATGAAGGTTGGTATTGCTCCATCACATATCTTTGCTTCATTTGCCAACCAGTGTGGAGGGTATGACAAGATTGGCTTTAGAAAGGCAGACATATATAACCAAATTCTACAGCAAAGGCGGAGGCATACTTCGGATGCTATGGCCACACTACAATTCTTGCAAGACTTGAGTTCAAAACAATCACCCATAGAATTGGAAGACGATTTTGCATCGATTCATGGAGACCCGGTTTTACGAAGCAATTTTGAAGGGATAGAGAGCTGTACACAAACGCTTTCATTTTTTATTTACAAAGTGTGTAAGGTTGGTCAGCGGAGGACGAAGGAATGGCACGTTTCTTTCTATCCGGATGAGTATGAGTTTAGTTGTTCATGCTTGTGGATGGAGTCACGTGGTCTACCATGTCATCATATAATTGTTGTGTTGGTTCATCTAGATATAGAAGAACTCCTTGCATCATTGGTTCTGAAAAGATGGAGTAAGGGTGCAAAGGATCATGTTAACTTTCATAGTGATTTGGGCAATAGGTGGGATTCACATAAGATTGCAAGAAGTGCAGCGTTGATGGAATTATACAGAATACTGTGTGATTTGAAATCTGACACAGTTGATGAATTCAATGAAGAGAGGGAGAGGCTTTTACGGGAAATAGAAGAGTGCAAGGCTAGAAAGGCAGCTCAAGTTGGACAGGGGAGTGCATCAACTCAGACTGACTTTGATGGTGTAAGAGACCCTGTCCGTGTAAACACCAAGGGGCGTGGTGGAATTTCTGGTTTAAGACCCATGAGGCGTACTAAATGCTCAAAATGTAAGCAACCTAGCCACAATAGGGTCACATGTCCAGTTGTTGAGGTTGGAGGTCATATGTCTCAACCTGCGCAAGAGGGTAATGATGACGATACCCTCAAAGAAGACTTTATTTGGTCCACTCAATAG 1593 0.4036 MDYTWDASIDEETLVKILEDLSCYESELNAKGVYASVVEEDGQVPFMVHDDLNNNDDHANGSDNSEHCIGINSEQDIRNLDLENFSPHDISKYDFASMDLAYLFYREYGKANGFSIRKGKILYSKKTREELQQEYFCSNNGLREDRGLKMEDRKREPRAETRCECQATFRAHVDKITGRWYATVFNDNHNHELLGPKFSGMLPGHRRMRQGDVVQMNNMMKVGIAPSHIFASFANQCGGYDKIGFRKADIYNQILQQRRRHTSDAMATLQFLQDLSSKQSPIELEDDFASIHGDPVLRSNFEGIESCTQTLSFFIYKVCKVGQRRTKEWHVSFYPDEYEFSCSCLWMESRGLPCHHIIVVLVHLDIEELLASLVLKRWSKGAKDHVNFHSDLGNRWDSHKIARSAALMELYRILCDLKSDTVDEFNEERERLLREIEECKARKAAQVGQGSASTQTDFDGVRDPVRVNTKGRGGISGLRPMRRTKCSKCKQPSHNRVTCPVVEVGGHMSQPAQEGNDDDTLKEDFIWSTQ 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi66g00132 530 ProSiteProfiles Zinc finger SWIM-type profile. 329 365 IPR007527 GO:0008270
Sebi66g00132 530 Pfam FAR1 DNA-binding domain 104 194 IPR004330 -
Sebi66g00132 530 MobiDBLite consensus disorder prediction 444 478 - -
Sebi66g00132 530 MobiDBLite consensus disorder prediction 507 530 - -
Sebi66g00132 530 SMART 26again6 340 367 IPR006564 GO:0008270
Sebi66g00132 530 PANTHER OS01G0519700 PROTEIN 326 496 - -
Sebi66g00132 530 Pfam SWIM zinc finger 341 364 IPR007527 GO:0008270
Sebi66g00132 530 Coils Coil 415 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi66g00132 Sebi-Chr66 2150518 2152991 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi66g00132 FAR1 2.5e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi66g00132 - - tpra:123913749 231.106