Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi66g00127 ATGTCCCTTCCAAAACCCTCTGATGGTAAAGCCCCTCAGCAGGTGAAAGAAGGAGCACCAGCAACAGCAACAGCTTCATCCTCTTCTTCATGGAATATGCAAAACAGCCACAGAAATACTTTCCCCCCTTTAACTCTACAGATCAAAAGAAGCAAACTTGAAGATAGTGATGAAGATATGTTCACAGTTCCAGACGTGGAAGGCACACCAATTAGTGTTCATTCTGCAGTGACTCTTCCAAATAGTAACCTCAATCAAAGTAACGTCACAAATCCTCAATCTCAAACTGGCTTTCCTGGAAAGCGCCGCAGGGGAAGAAACCCTGCAGATAAGGAACATAGACGCCTCAAGAGGGTCTCTGCTCAACAAGCCCGCGAAAGAAAGAAGGTTTATGTGAATGACTTGGAATCAAGGGCTACAGAGTTGCAAGACAAAAATGCTATCTTAGAAGAGCGCATCTCAACTTTGATCAATGAGAACACCATGCTGCGGAAGGTTCTTATGAACGCAAGGCCAAAAGTTGATGATAGCATTGAACAGAAGCAGGATCAGTTGAGTAAAAGCTAA 567 0.4392 MSLPKPSDGKAPQQVKEGAPATATASSSSSWNMQNSHRNTFPPLTLQIKRSKLEDSDEDMFTVPDVEGTPISVHSAVTLPNSNLNQSNVTNPQSQTGFPGKRRRGRNPADKEHRRLKRVSAQQARERKKVYVNDLESRATELQDKNAILEERISTLINENTMLRKVLMNARPKVDDSIEQKQDQLSKS 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi66g00127 188 MobiDBLite consensus disorder prediction 80 125 - -
Sebi66g00127 188 SUPERFAMILY Leucine zipper domain 117 168 IPR046347 GO:0003700|GO:0006355
Sebi66g00127 188 CDD bZIP_HY5-like 111 160 - -
Sebi66g00127 188 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 18 184 IPR044280 GO:0000981|GO:0045944
Sebi66g00127 188 Coils Coil 132 159 - -
Sebi66g00127 188 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 107 170 IPR004827 GO:0003700|GO:0006355
Sebi66g00127 188 MobiDBLite consensus disorder prediction 1 61 - -
Sebi66g00127 188 MobiDBLite consensus disorder prediction 19 46 - -
Sebi66g00127 188 MobiDBLite consensus disorder prediction 80 100 - -
Sebi66g00127 188 SMART brlzneu 107 169 IPR004827 GO:0003700|GO:0006355
Sebi66g00127 188 Gene3D Single helix bin 128 169 - -
Sebi66g00127 188 Pfam bZIP transcription factor 112 165 IPR004827 GO:0003700|GO:0006355
Sebi66g00127 188 FunFam Transcription factor HY5 128 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi66g00127 Sebi-Chr66 2123671 2125083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi66g00127 89 177 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 68.367 3.02e-36 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi66g00127 bZIP_1 4.7e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi66g00127 K16241 - gmx:100783826 291.197