Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi66g00126 ATGAACAATGCAACAACTTTGGTTCTTGTTAGAGCAAAATTTGTGTACAAGAACTATGATGGACTTGGGAAACCCCCTAGATTTTCTGTTTCTATTGGGACAGCTATTGCTGCTACAATAAATCTTGCTGAACATGATCCATGGAATGAAGAATTACTATGGACAGTGAATAAGGATACACTTCCATTCTGTTTAATTTCAATTCCAAAAGGTGGTTCACCTGTAATTTCTTCCCTTGAAATCAGACCACTTCCTCAAGGAGCCTACACAAGTGGCATTGAAGATTTTCCAAATAAGCTGCTAAGGAAGACTTATCGAATTGATTGTGGATACACCAATGATTCTATCCGGTATCCCTTGGATCCATTTGATAGAATATGGGATGCTGATAGAAACTTCACACCCCTTCATGTTGCAATTGGGTTTAAGAGTCAGCATAGCTTTAATCAATTCAGTCTTTTGGAGGAACCACCAGCAGCTGTTATTCAAACTGGGAGAGTTTTGGCAAGACGAAATATGCTGACATATAACCTCCCTCTTAGCACATTAGGGGACTACTACATCATCCTCTACTTTGCTGGAATTCTTCCTGTCTTCCCCTCATTTGATGTTTTAATAAATGGAGATCTAGTAAAATCAACCTACACAATAAAAAACTCAGAAATCAGTGTTTTATATGTTACACAAAAGGGAATCAGCAGCTTGAATATAACACTGAAGAGGATAAGCTTTTACCCTCTGATCAATGCATTTGAGGGATTTGCACAACACATCGCTTTCAGGAATCTGGAAAACAACAAACTACAAGGTCCACTACCACAGTCTTTGAAGAAAGAAACTTTAGAGATCAGAGCATCTGGGAATTTGTGCCTTACCTTTTCCACAACCAAATGTGATGATGCATCATCCAATCATTCAATTGAGACACCCCAAGTTACTTTGGTTCCTAAGAAGAAGCACAATGTACTTAACCATCTAGCAATAGTTCTAGGCATTGGAGGAGCCACAGTAGCCTTTCTCTTAATGTGTGTTTCAGTATTTATATACAAGACTAAACAGAAATATAAAGTCTCACAGACAACAAGAGAAGAAATGGATATGAGGAATTGGGGTGCAGCAAAAGTCTTTTCCTACAAAGAAATCAAATTAGCTACAAGAAACTTCAAAGAAGTTATAGGAAGGGGAAGTTTTGGATCTGTTTATCTTGGAAAACTTCCAGATGGAAAATCAGTAGCTATCAAAGTTCGGTTTGATAAATCCCAACTTGGTGCTGATTCTTTTATTAATGAGGTTAATCTTTTGTCAAAAATCCGGCATCAAAATCTTGTGTCTTTGGAAGGATTTTGTCATGAATCAAAACATCAGATATTAGTTTATGAGTACTTACCTGGTGGACCCCTGGCTGATCATCTCTATGGTACAATCAGTCAAAAAACTTCCTTAAGCTGGGTTCGGAGGTTGAAAATTGCTGTTGATGCAGCAAAAGCATTGGATTATTTGCACAATGGAAGTGAGCCACGAATCATACACCGTGATATAAAGTGCAGTAATATCCTTTTGGATAGGGATATGAATGCCAAGGTGTGTGACTTAGGTCTCTCTAAGCAAGTAACTCATGCAGATGCAACTCATGTCACAACTATTGTCAAGGGCACAGCAGGGTATCTTGATCCAGAGTATTATTCAACTCAGCAGCTGACAGAGAAAAGTGATGTATATAGTTTTGGAGTTGTTCTTTTGGAACTCATTTGTGGAAGAGAGCCATTGACTCACTCTGGAAATCCCGACTCATTCAATTTGGTGTTATGGGCAAAGCCCTACTTGCAGGCAGGTGCATTTGAGATTGTGGATGAGGACATAAAAGGAACTTTTGATCCCTTGAGCATGAAGAAGGCAACTTTCATTGCTATAAAGTCAGTGGAGAGGGATGCATCACAGAGGCCATCTATTGCAGAGGTATTGGCAGAGCTAAAAGAAGCCTATAGTATTCAGCTCAGATTCCTTGAATCTTGTCAAAATGAGAATTGA 2028 0.3876 MNNATTLVLVRAKFVYKNYDGLGKPPRFSVSIGTAIAATINLAEHDPWNEELLWTVNKDTLPFCLISIPKGGSPVISSLEIRPLPQGAYTSGIEDFPNKLLRKTYRIDCGYTNDSIRYPLDPFDRIWDADRNFTPLHVAIGFKSQHSFNQFSLLEEPPAAVIQTGRVLARRNMLTYNLPLSTLGDYYIILYFAGILPVFPSFDVLINGDLVKSTYTIKNSEISVLYVTQKGISSLNITLKRISFYPLINAFEGFAQHIAFRNLENNKLQGPLPQSLKKETLEIRASGNLCLTFSTTKCDDASSNHSIETPQVTLVPKKKHNVLNHLAIVLGIGGATVAFLLMCVSVFIYKTKQKYKVSQTTREEMDMRNWGAAKVFSYKEIKLATRNFKEVIGRGSFGSVYLGKLPDGKSVAIKVRFDKSQLGADSFINEVNLLSKIRHQNLVSLEGFCHESKHQILVYEYLPGGPLADHLYGTISQKTSLSWVRRLKIAVDAAKALDYLHNGSEPRIIHRDIKCSNILLDRDMNAKVCDLGLSKQVTHADATHVTTIVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLTHSGNPDSFNLVLWAKPYLQAGAFEIVDEDIKGTFDPLSMKKATFIAIKSVERDASQRPSIAEVLAELKEAYSIQLRFLESCQNEN 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi66g00126 675 ProSiteProfiles Protein kinase domain profile. 386 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi66g00126 675 Gene3D Phosphorylase Kinase; domain 1 347 461 - -
Sebi66g00126 675 ProSitePatterns Protein kinases ATP-binding region signature. 392 414 IPR017441 GO:0005524
Sebi66g00126 675 Gene3D - 102 255 - -
Sebi66g00126 675 SMART serkin_6 386 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi66g00126 675 Pfam Malectin-like domain 6 254 IPR024788 -
Sebi66g00126 675 PANTHER OS07G0107800 PROTEIN-RELATED 262 661 - -
Sebi66g00126 675 FunFam serine/threonine-protein kinase PBS1-like 352 461 - -
Sebi66g00126 675 SUPERFAMILY Protein kinase-like (PK-like) 373 660 IPR011009 -
Sebi66g00126 675 Gene3D Transferase(Phosphotransferase) domain 1 462 670 - -
Sebi66g00126 675 Pfam Protein kinase domain 388 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi66g00126 675 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 462 668 - -
Sebi66g00126 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 508 520 IPR008271 GO:0004672|GO:0006468
Sebi66g00126 675 CDD STKc_IRAK 392 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi66g00126 Sebi-Chr66 2114094 2119150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi66g00126 270 670 Receptor kinase-like Gene Family AT5G48740 70.647 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sebi66g00126 Pkinase 2.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi66g00126 - - gmx:100812804 748.429