Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi66g00122 ATGAATGGACAAAATCATGTCATATGGTCAACAAATTTGTCAAGCACCACCAATTCAAGTGCTAAACTTGATGATTCAGGAAATTTGATCCTGAGAGATGTCACAAGTGGAGCTACACTATGGGACAGTTTCACACACCCTTGTGATGCAGCTGTGCCACAGATGAAAATTGGTGCTAACAGGGTCACAGGTAGTCTTGAACGTTTGGATGCTCCAGAAGTGTTTTTTTGGTTGAATAAAACTCAACCATATTGGAGAACTGGTCCATGGAATGGAAGGGTCTTCCTTGGAGCACCAAGGATGTTAACTGAGTATCTATTTGGATGGCGTTTAGATCATGATGATGATGGCACTGTTTATCTAACTTACAGTTTTGCTGACCCTTCTGCCTTTGGAATTCTCACCTTGACTCCACATGGCACACTAAAATTGGGGTTTGAGCCCAGGAATTCTGATGAATGGAGCAGGAAAAATTGGACTAGTGGATGTGTGAGAAAGGCAGAGGCACCACTACAGTGTGAGAAGTTGAAAAATGGAAGTAATGTACAACAAGATGGGTTTTTGGTGTTTCATAATATGAAAGTACCAGACTTTGCAGAGAGATCAGATGGTAATCAAGACAAATGCGGAACAGATTGCTTAGCAAATTGTTCTTGTTTGGCATATGCATATGATTCTTATGTGGGGTGCATGTACTGGAGTAAAGACTTAATTGACTTGCAGAAGTTTCCTTATGGAGGGATTGATCTCTTCATTCGTGTGCCAGCACAACTTCTTATTACAGACCAGGTCAAAAAGGAAAGAGGAAACAAGGCATTAATAATTATTGCTATTGCTGGGGGAATTGGAGCATTAACCTTTGCTATCTGTGCTTATCTTATGTGGCGGAAATATACTGCTAGGCCTACAGGAAGTCAGCCTCAAGACTTGATGATTGGAGACAATAGACAAATGAAATTGGATGAGCTACCACTATATGGTTTTGAAAAGCTTGCAATTGCAACAAACAACTTTCACTTAGCTAATAAGCTTGGGAAGGGAGGTTTTGGTACTGTATATAAGGGAGAATTGGATGATGGCCAAGAAATTGCTGTGAAAAGACTATCCAAAGCTTCTGGACAAGGATTAGAAGAATTCATGAATGAAGTGGTGGTGATTTCTAAACTTCAACATCGCAATCTTGTAAGACTCCTTGGTTTTGTGTTGAACGAGATGAACAAATATTAG 1227 0.401 MNGQNHVIWSTNLSSTTNSSAKLDDSGNLILRDVTSGATLWDSFTHPCDAAVPQMKIGANRVTGSLERLDAPEVFFWLNKTQPYWRTGPWNGRVFLGAPRMLTEYLFGWRLDHDDDGTVYLTYSFADPSAFGILTLTPHGTLKLGFEPRNSDEWSRKNWTSGCVRKAEAPLQCEKLKNGSNVQQDGFLVFHNMKVPDFAERSDGNQDKCGTDCLANCSCLAYAYDSYVGCMYWSKDLIDLQKFPYGGIDLFIRVPAQLLITDQVKKERGNKALIIIAIAGGIGALTFAICAYLMWRKYTARPTGSQPQDLMIGDNRQMKLDELPLYGFEKLAIATNNFHLANKLGKGGFGTVYKGELDDGQEIAVKRLSKASGQGLEEFMNEVVVISKLQHRNLVRLLGFVLNEMNKY 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi66g00122 408 FunFam Os08g0179000 protein 312 408 - -
Sebi66g00122 408 Gene3D - 1 67 IPR036426 -
Sebi66g00122 408 Pfam S-locus glycoprotein domain 85 157 IPR000858 GO:0048544
Sebi66g00122 408 ProSiteProfiles Protein kinase domain profile. 338 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi66g00122 408 Pfam D-mannose binding lectin 2 69 IPR001480 -
Sebi66g00122 408 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 5 143 - -
Sebi66g00122 408 SUPERFAMILY alpha-D-mannose-specific plant lectins 4 92 IPR036426 -
Sebi66g00122 408 SUPERFAMILY Protein kinase-like (PK-like) 324 404 IPR011009 -
Sebi66g00122 408 CDD PAN_AP_plant 170 255 - -
Sebi66g00122 408 ProSiteProfiles Bulb-type lectin domain profile. 1 44 IPR001480 -
Sebi66g00122 408 Pfam Protein tyrosine and serine/threonine kinase 339 405 IPR001245 GO:0004672|GO:0006468
Sebi66g00122 408 SMART ntp_6 182 254 IPR003609 -
Sebi66g00122 408 Gene3D Phosphorylase Kinase; domain 1 307 408 - -
Sebi66g00122 408 ProSiteProfiles PAN/Apple domain profile. 173 255 IPR003609 -
Sebi66g00122 408 Pfam PAN-like domain 182 240 IPR003609 -
Sebi66g00122 408 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi66g00122 Sebi-Chr66 2018709 2020779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi66g00122 265 402 Receptor kinase-like Gene Family AT4G21410 46.853 2.80e-28 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi66g00122 S_locus_glycop 4.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi66g00122 - - gmx:100786846 575.859