Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi66g00119 ATGGCTGTTCCAAAAGTGAACGAAAAGTTGCTTGAAGACCTTGAAGGAATGGGATTTCCACAGGCACGGGCAACCAGAGCACTTTATTATTCTGGAAATACCAGCTTAGAGGATGCTATAAATTGGATGATTGATCATGAGAATGACACTGATATTGATGAGATGCCGTTGGTAGATGTAGACATTGATATTGAGTCCTCTCAATCATTCCCTATCACAGAAGAAATGAGAATCAAAGCACAGAATTTAAGGGAACAAGAGCGTAAGAGGAAAGAGAATGAAGAAAAAATATTGGAGAGAGAAAGAGAGAAGAAGAGGATTCAAGCAGGTAAGAAACTTCTTGAGGTTAAGCGAATTGCCGAAGAAAATGAAAGAAAACGGAATATATCCTTGAGAAAAGCAGAAAAAGAAGAAGAGAGAAGGGCTAGGGAAACTGTTCTCCAAAAACTAGAGCAGGATAAGTTAAATAGAAGGTCTAAACTTGGATTGCCTTTAGAAGGCCAAGCAACTGTGAGATCATCCACTACTGCAGTAAAGCAAGAAAAGAATTTGAAGTCTGTTTATACAACTGCAAAAGTAGAGCATTTGAGACAATGTCTGAGGTCTCTCAAGCGTAACCACCAGGGTGAGAATGCCAGAGTCAGAAAGGCCTTTGAGACACTTCTAGTGTATGTTGGAAATGTTGCCAAGAATCCCAAGGAGGAAAAGTACAGGAAGATCAGATTGAGCAACCCATTATTCCAGGATAGAGTTGGAAGTTTAAATGGAGGCATAGAGTTTCTTGAGCTCTGTGGTTTTGAGAAAACTGGTGATTTCTTGTATCTTCCTCATGAAAAGGTTGACATGGAACTACTAAATTCAGCTGGTTCTGTCTTAAATTCTGCAATGACAAATCCTTTCTTTGGAGTTTTAAGTACTTAG 921 0.392 MAVPKVNEKLLEDLEGMGFPQARATRALYYSGNTSLEDAINWMIDHENDTDIDEMPLVDVDIDIESSQSFPITEEMRIKAQNLREQERKRKENEEKILEREREKKRIQAGKKLLEVKRIAEENERKRNISLRKAEKEEERRARETVLQKLEQDKLNRRSKLGLPLEGQATVRSSTTAVKQEKNLKSVYTTAKVEHLRQCLRSLKRNHQGENARVRKAFETLLVYVGNVAKNPKEEKYRKIRLSNPLFQDRVGSLNGGIEFLELCGFEKTGDFLYLPHEKVDMELLNSAGSVLNSAMTNPFFGVLST 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi66g00119 306 CDD PUB_UBA_plant 200 304 - -
Sebi66g00119 306 Coils Coil 76 108 - -
Sebi66g00119 306 Coils Coil 119 153 - -
Sebi66g00119 306 SUPERFAMILY UBA-like 5 57 IPR009060 GO:0005515
Sebi66g00119 306 PANTHER F13M7.16 PROTEIN 1 304 - -
Sebi66g00119 306 SUPERFAMILY PUG domain-like 194 300 IPR036339 -
Sebi66g00119 306 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 5 46 IPR015940 -
Sebi66g00119 306 SMART uba_6 7 45 IPR015940 -
Sebi66g00119 306 SMART PGNneu 216 277 - -
Sebi66g00119 306 Pfam PUB domain 213 281 IPR018997 -
Sebi66g00119 306 Pfam UBA/TS-N domain 7 42 IPR015940 -
Sebi66g00119 306 CDD UBA_PUB_plant 6 53 - -
Sebi66g00119 306 Gene3D - 8 53 - -
Sebi66g00119 306 Gene3D - 190 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi66g00119 Sebi-Chr66 1939739 1948217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi66g00119 1 304 C2H2 Transcription Factor Family AT1G04850 59.091 3.07e-103 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi66g00119 - K24348 gmx:100781260 476.478