Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi66g00047 ATGAACGACAGTGACAACAGCCAAAACGGCACCTTACAAACACTGGATTTTGAAAACCTGAAAGTTATCTCCGCCGTGGGACGCGGCGCTAAGGGTGTCGTCTTCCTCGCAAGAACCGGTGATCGGTCTTCAAACGAGTGTTTGGCTCTGAAAGTGATCTCAAAAGCTCTGATACATCAAAAGAAGGCAAAGAATAAAAACAAGAAAAACGACAACGACGGTCCCGGCGAGTACAAGAGGGTGTCGTTTGAACAAGAAGTGCTAGGTCGTTTTGATCATCCCCTTTTGCCGCGGTTGCGAGGGGTTTTGGAAACTGAAAATGTTGTCGGCTTCGCCATTGATTATTGCCACGGTGGCAACCTCCATTCTCTTAGGAAGAAACAGACTGAGAAAATGTTCTCCGATGATACCATCAGGTTTTACGCGGCGGAATTGGTTCTCGCATTGGAATATTTGCACGAATTGGGAATAGTGTACAGGGATTTGAAGCCAGAGAACGTGATGATCCAAGAAAACGGTCACATAATGCTCATCGATTTCGATCTCTCCACGAAGCTAAACCCTAAATCCCCTCAATCACTGAGTCGTGACTCGTCAGTGAGTTCTAACTCGGCGACGGAGAATCACACGGCGAAGCGACGGCTCTCGCGATTCTACACATACTGTAACTCGGGCATCTTGCCGTGTGACTCGGACTCGGAGCCCCAACCTGCCGTCAGCTCAGCGCGGTGGAGCGAGTCAGACTCAGTCGAGAAATCGAACTCGTTCGTCGGAACGGAGGAGTACGTGGCGCCTGAAATTGTATGCGGAAAGGGTCACAGTTTCAGCGTTGATTGGTGGTCACTCGGCGTTGTTTTGTACGAAATGCTATACGGAACGACGCCGTTTAAGGGGACAAATAGAAAAGAAACGTTTTACCGGATTTTGACCAAGGAGCCGGAGTTGACGGGGGAAAAGACGGCGTTGAGGGATTTGATTGGGAGATTGCTGGAAAAGGACCCTGACCGTCGGATCCTGGTCGATGAAATCAAGGGCCACGATTTCTTCAAAGGGGTTAAGTGGGATACGGTGTTGCAAATAGCAAGGCCACCTTATATTCCTCAAATTGAGGTTGAGAATGAGAAGACAAGGGGATTTAGAAAAAACGAAGTGGAGTTGTTTGTCCATGAGGTTTTTTTTCCCAAGTGTGATGATGATGAAGAGAAAAATAAGAAAGTGGAGATCAAGAGCGAGGCCTTGAAGAGAGAAGGTGATGATTTGGTTGTCATCGGAGGCTTGGACCCGACCGGCGTTTGCAATGCCATTGTCACCAAGCATGCTTCATCTCCCATCTTTTATGAAGCAGCAGCCGTTGGCGGTGGTTGA 1365 0.485 MNDSDNSQNGTLQTLDFENLKVISAVGRGAKGVVFLARTGDRSSNECLALKVISKALIHQKKAKNKNKKNDNDGPGEYKRVSFEQEVLGRFDHPLLPRLRGVLETENVVGFAIDYCHGGNLHSLRKKQTEKMFSDDTIRFYAAELVLALEYLHELGIVYRDLKPENVMIQENGHIMLIDFDLSTKLNPKSPQSLSRDSSVSSNSATENHTAKRRLSRFYTYCNSGILPCDSDSEPQPAVSSARWSESDSVEKSNSFVGTEEYVAPEIVCGKGHSFSVDWWSLGVVLYEMLYGTTPFKGTNRKETFYRILTKEPELTGEKTALRDLIGRLLEKDPDRRILVDEIKGHDFFKGVKWDTVLQIARPPYIPQIEVENEKTRGFRKNEVELFVHEVFFPKCDDDEEKNKKVEIKSEALKREGDDLVVIGGLDPTGVCNAIVTKHASSPIFYEAAAVGGG 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi66g00047 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Sebi66g00047 454 Gene3D Phosphorylase Kinase; domain 1 20 119 - -
Sebi66g00047 454 Pfam Protein kinase domain 251 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi66g00047 454 Pfam Protein kinase domain 22 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi66g00047 454 FunFam Serine/threonine-protein kinase OXI1 251 368 - -
Sebi66g00047 454 FunFam Serine/threonine-protein kinase OXI1 120 188 - -
Sebi66g00047 454 Coils Coil 396 416 - -
Sebi66g00047 454 SUPERFAMILY Protein kinase-like (PK-like) 18 382 IPR011009 -
Sebi66g00047 454 Gene3D Transferase(Phosphotransferase) domain 1 120 189 - -
Sebi66g00047 454 Gene3D Transferase(Phosphotransferase) domain 1 249 368 - -
Sebi66g00047 454 SMART serkin_6 20 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi66g00047 454 PANTHER FLIPPASE KINASE 1-RELATED 13 375 - -
Sebi66g00047 454 ProSiteProfiles Protein kinase domain profile. 20 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi66g00047 454 MobiDBLite consensus disorder prediction 189 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi66g00047 Sebi-Chr66 692747 696676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi66g00047 13 409 AGC Kinase Gene Family AT3G25250 60.396 6.57e-156 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sebi66g00047 Pkinase 4.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi66g00047 K20714 - gmx:100785773 587.415