Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi66g00043 ATGCCTGAACAAATTCCATATGGTGTTGCTGCAAGCATCATTGAGAGGTTGGCTTCAGCAGCCTTTCGTGAATTTGGACGGATTTATCATGTCATGGATGAGTTGGAAATGCTTAAGAGTACAATGGAATCCATCAAAGCTGTGCTTCTTGATGCTGAAGAGAGACAAGAACAAGATCTTGCTGTGCAAATCTGGATAAGAAGGCTCAAAGAAGTACTGCATCCTGCAGATGATTTGCTAGATGAAATTGTCATTCAAGATATGAGACACAAAGCTGATTCAGGTCCTAAGCAAGTATTTCATTTCTCATCTCCAAACCAAATTGCTTTTCACCGTAAAACGGCTCGTAAAATTGAAAAAATACGAAAAAAATTTAATGATGTAGTGCAAGAAATGTCTCAGTTGAATTTAAGCCCAAGAGCTGTGGTGGTTAAACAAATTGGTAGTGTAAGGAGGGAAACTAGTTCTTTTGTGTTAGAATCAGATATCATTGGAAGAGAGGATAATAAAATGGAGATTATAAATTTGTTGAGGCAATCACATAAAAGTCAGAATGTTTCCTTAGTTGCTATTGTTGGTATTGGTGGTTTAGGCAAGACAGCTCTTGCTCAATTGGTATATAATGATGTGGAAGTGCAAAATTTGTTTGAAAAGCGAATGTGGGTATGTGTCTCTGATAACTTTGATGTCAAAGTTATTCTAAAGAACATGTTGGAGTCATTAGCCAATAAAAAAATTGATGATAAGTTATCACTAGACACCTTGCAAAACAAGCTTCGTGAAAATTTAACTGGTAAAAGATACTTGTTAGTTCTAGATGACATTTGGAATGAAAGTCTTGAAAAATGGGATCAGTTGAGAACTTACCTGATGTGTGGTGCTCAAGGTAGTAAGGTTTTAGTGACAACCCGTAGTAAAAATGTGGCACGGACAATGGGTGTAAGCGACCCCTTTGTTTTGAATGGTTTGACTTCAAAAGAATCTTGGAGCTTGTTAAAGAAAATTACATTTGGGGATGCTACTAGGAGAGTGAATCAAACTCTAGAATCAACCGGTAAGAAGATAGCAAAAAAGTGTAGAGGTGTTCCACTAGCAATTAGAACACTAGGAGGCCTATTGCAGAGCAAAAGTGAAGAAATTGAATGGATTGGTGTTTTACAAGGTGACTTTTGGAAATCAAGTGAAGACGAAGACAGTATCATGCCAGTTCTAAAACGAAGTTACCAGAACTTGTCGTCTCAACAAAGACAATGTTTTGCATATTGCTCTTTATATCCTAAGGATTTGAAAATTGAAAAGGATGAGTTGATTCAACTATGGATGGCACAAGGTTATCTTGATTGTTCAACTGAAAAGCAGACTATGGAAGATGTTGGTAACCAATTTGTAAAGACTTTCTTAATGAAGTCTTTTTTTCAAGATGCGGAAATGACCGAACATGGTGATATAGTTAGTTTCAAGATGCATGATTTAATGCATGATCTTGCGATGCTAGTGGCTGGCAATGATTGTTGTTACTTGGATAATATTAGTGAGGCAAATAAACTTGAAGGAAGACCCATGCATGTTTGGTTGAAATCTAGTGCCATTGGTTTGTTGCGCTCATTGGATGCAAGCAAGCTGCGAACTTTGATTTTGACGCATTACAACGGGGGAGAAAATTCTGTTATTACAAAGTTCAAATACTTGCGTGTTTTGAAGTTGTCATCTTCTGCTTTAATCAAGTTTCCTGGTTCAATTGGAAGATTGACGCATTTAAGATATCTTCACTTATTGCGGTGCAATTGTTTGACACGTCTTCCCAAATCCATAAGCAATCTTGTTTGCTTACAAACATTTAAATTGGAGGTGTGTTATTATCTTCAATTTTCCACAAAAGTTGTCTCAAAATTAATCAATTTGAGACACCTTGAAATCAATCATTGGAAAACCTCCGGAGACAAGATGACAATTGGAATGGGAAAATTGAGCGTGCGGTGCTATGAGGGTAATTTTGTTAAAGTACTACGTGTGATTCATTTAAACTTCCTTTCTTCTTTCACAAATATTGTTGAAATCTCTCTTGGTCAGTGTTCAAGTACCCAAAGTTTCCCACCACCAAGTTGTCGGTATCTCCCACCATTGGAAAGTCTCCCATTCCTTAAGTCACTAAAGATAAGTTCATTTAAAGAACTAGAATACATATATCTTGAAGAGAATTTTCTTGTAACATTCTTCCCATCTTTGGAGACACTCAGTTTTCAATATTGTAGAAAGCTCAGGGGATGGTGCAGGATGGGAGATGATTTCAATGATGCTAATAGTTCTTCACATCATCTCTTGTTGCCTTCGTTTCCTCGTCTTTCTCAATTATTAATCCATAATTGTCCGAGGTTGACTTGCATGCCTACTTTTCCAAGCTTGGATAAGAGATTGGAATTGTGTGATTGTAATGTGGAGCCATTGGAAGCAACTCTAAAGACAGTGGTATCAAAATGTTCAGTTGACTTCACTCCTCTTTCCATGCTCAAATCTTTGCGCATTGGTGGAAGTTTGGACGTGAAAAAATTCCCTGAGAATTGGATGCAAAATCTTACTTCTCTTGAGCATCTTGTATTCCTATACTTTTCAAGTCAAACATTTCATGACATTGAGTTTTGGTTTAAGGATGACTTCAAATCTCTTCCTTCTCTGCAAAAAATCACTGTGCAATTTTGTATAGACCTAAAGGCCTTGCCAGATTGGATATGCAACTTCTCATCGCTTCAGCATGTCACAATGTCATATTGCAAAGATTTGGCATCGCTGCCTGAAGAAATGCCTCGTCTTACCAAGTTACAGACCCTAAAAATCATTGGATGTCCCCTCCTAATTAGAGAATGCCAAATAGAAGCAAGTGCAGCTAGGCCCAAAATTGCTCACATCCCGAACATAATCTTAAAGCACTCTCCGTTTCGAAGGATGGGAAGACTCATTGTTTGA 2961 0.3745 MPEQIPYGVAASIIERLASAAFREFGRIYHVMDELEMLKSTMESIKAVLLDAEERQEQDLAVQIWIRRLKEVLHPADDLLDEIVIQDMRHKADSGPKQVFHFSSPNQIAFHRKTARKIEKIRKKFNDVVQEMSQLNLSPRAVVVKQIGSVRRETSSFVLESDIIGREDNKMEIINLLRQSHKSQNVSLVAIVGIGGLGKTALAQLVYNDVEVQNLFEKRMWVCVSDNFDVKVILKNMLESLANKKIDDKLSLDTLQNKLRENLTGKRYLLVLDDIWNESLEKWDQLRTYLMCGAQGSKVLVTTRSKNVARTMGVSDPFVLNGLTSKESWSLLKKITFGDATRRVNQTLESTGKKIAKKCRGVPLAIRTLGGLLQSKSEEIEWIGVLQGDFWKSSEDEDSIMPVLKRSYQNLSSQQRQCFAYCSLYPKDLKIEKDELIQLWMAQGYLDCSTEKQTMEDVGNQFVKTFLMKSFFQDAEMTEHGDIVSFKMHDLMHDLAMLVAGNDCCYLDNISEANKLEGRPMHVWLKSSAIGLLRSLDASKLRTLILTHYNGGENSVITKFKYLRVLKLSSSALIKFPGSIGRLTHLRYLHLLRCNCLTRLPKSISNLVCLQTFKLEVCYYLQFSTKVVSKLINLRHLEINHWKTSGDKMTIGMGKLSVRCYEGNFVKVLRVIHLNFLSSFTNIVEISLGQCSSTQSFPPPSCRYLPPLESLPFLKSLKISSFKELEYIYLEENFLVTFFPSLETLSFQYCRKLRGWCRMGDDFNDANSSSHHLLLPSFPRLSQLLIHNCPRLTCMPTFPSLDKRLELCDCNVEPLEATLKTVVSKCSVDFTPLSMLKSLRIGGSLDVKKFPENWMQNLTSLEHLVFLYFSSQTFHDIEFWFKDDFKSLPSLQKITVQFCIDLKALPDWICNFSSLQHVTMSYCKDLASLPEEMPRLTKLQTLKIIGCPLLIRECQIEASAARPKIAHIPNIILKHSPFRRMGRLIV 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi66g00043 986 CDD RX-CC_like 7 124 IPR038005 -
Sebi66g00043 986 SUPERFAMILY L domain-like 487 970 - -
Sebi66g00043 986 Gene3D Ribonuclease Inhibitor 509 760 IPR032675 -
Sebi66g00043 986 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 422 IPR027417 -
Sebi66g00043 986 Gene3D Ribonuclease Inhibitor 777 962 IPR032675 -
Sebi66g00043 986 Gene3D - 10 134 - -
Sebi66g00043 986 Gene3D - 408 497 IPR036388 -
Sebi66g00043 986 PRINTS Disease resistance protein signature 188 203 - -
Sebi66g00043 986 PRINTS Disease resistance protein signature 359 373 - -
Sebi66g00043 986 PRINTS Disease resistance protein signature 910 926 - -
Sebi66g00043 986 PRINTS Disease resistance protein signature 262 276 - -
Sebi66g00043 986 Pfam Rx N-terminal domain 11 103 IPR041118 -
Sebi66g00043 986 Gene3D - 322 407 IPR042197 -
Sebi66g00043 986 FunFam Probable disease resistance protein At1g63360 408 498 - -
Sebi66g00043 986 Gene3D - 148 316 IPR027417 -
Sebi66g00043 986 Coils Coil 35 55 - -
Sebi66g00043 986 PANTHER DISEASE RESISTANCE PROTEIN RP 35 786 IPR044974 GO:0006952
Sebi66g00043 986 FunFam Probable disease resistance protein At1g61300 146 317 - -
Sebi66g00043 986 Pfam NB-ARC domain 167 410 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi66g00043 Sebi-Chr66 607361 610963 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi66g00043 185 446 WRKY Transcription Factor Family AT5G45050 24.727 1.11e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi66g00043 - - tpra:123883200 1139.02