Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi66g00030 ATGGCTGAGCAAATTCCATACGGTGTTGCTTCAAGCATCATTGACAGGTTGGCTTCTGCAGCCTTTCGTGAACTTGGGCTGATTTATGGTGTCAGGGATGAGTTCGAAAGCCTTAAGACCACAGTTGAATCTATTAAAGCTGTGCTACTTGATGCTGAAGAGAGACAAGAACGGGATCATGCTGTGCAGATCTGGATAACAAGGCTCAAAGATGTGCTTTATCCTGCAGATGACTTGCTTGATGAATTTTCCATTGAGGATATGAGACACAAACTGGATGCAGGTCACAAGAACAAAGTCAAAGAGGTATTTCATTTCTTATCTCCAACTCCAGTTGCTTTTCGCCTTAAATTTGCTCATAAAATTGAAAAAATACGAAAAGATTTCAATGATGTAGTGCAAGAAATGTCTATCTTGAATTTAAGCCCAAGAGTTGTGGTGGTTAAACAAAGTGACAGTGTAAGGAGGGAAACTAGTTCTTTTGTGTTAGAATCTGATATCATTGGAAGAGAAGATAGTAAAAAGGAGATTATAAGCAAGACAGCTCTTGCTCAATTGGTTTATAATGATGTGGAAGTGCAAAACTTTTTTGAAAAGCGAATGTGGGTATGTGTCTCTGACAACTTTGATGTCAAAACTATTGTGAAGAAAATGCTGGAGTTATTAACCAATAGTCAAATTGGTGATGAGTCATTGGAGAAATTGCAAACTATGTTGCGTGAAAATTTAACCGGTAAAAGATACTTGTTAGTCCTGGATGACATTTGGAGTGAGAGTCATGAGAAATGGGCTCAATTGAGAACTTACTTGATGTGCGGCACGCAAGATAGTAAGATTTTAGTGACAAGTCGGAGTAAAATTGTGGCACGAACAATGGGTGTAAATGTCCCCTATGTTTTGAATGGTTTGACTACAGAAGAATCTTGGGATTTGTTAAAGAAAATTACATTTGGGGATGATACCATGGGAGTGAACCAAACTCTAGAATCAATTGGTAAAAAGATAGCAGAGAAGTGCAGAGGTGTTCCTTTAGCAATTAGAACACTGGGAGGCGTATTACAAAATAAAAATGAAGAAAGTGAATGGATTGGTGTTTTACAAGGTGACTTTTGGAAATTATGTGAAGAGGAGGATAGTATCATGCCGGTTTTAAAACTGAGTTACCAAAACTTGTTGCCTCAACAGAGACAATGTTTTGCGTATTGCTCTTTATATCCCAAGGATTGGGAAATTGAGAAGGATGATTTGATTCAACTATGGATGGCACAAGGTTATCTTGAATGTTCAACTGAAAAGCAACTCATGGAAGATGTTGGTAACCAAATCGTGAAGGTCTTCTTGATGAAGTCATTTTTTCAAGATGCAAAAATGAATGAGCATGGTGACATAATGTGTTTCAAGATGCATGATTTAATGCATGATCTTGCGATGCATGTAGGTGGCAATGATTGTTGTTACTTAGATGGTGAGGCAAAAAGACTTGTGGAAAGACCCATGCATTTATCATTAGAAATGAATGCCATTCATTTATTGAGCTCATTGGATGCAATCACAAATATCGTTGAAATATCTCTCTCTGTTTGCCGCAATTTCCGATATCTCCCTCCATTGGAACGTCTCCCATTCCTTAAGTCACTTAGTCTACATTTCCTTGATGATCTAGAGTACATATATTATAAAGAGAGTTTTCCTGGAACATTCTTCCCATCTTTGGAGAGACTCATAATTTTCTTCTGCCAAAAGCTCAAGGGATGGTGCAGGATAGGAGATGAATCTAATGATACTAACAGTTCTTCAAATCATCTCTTATTGCCTCCATTTCCACGTCTTTCATATTTATGCATCAACAATTGTTCGATGTTGATTCACATGCCTACTTTTCCGAACCTCGATAAGAGCTTGGAATTGAGTGATTGTAGTATGGTGCCATTGGAAGCAACACTAAACATAGCAGTTGACTTCATTCCTTTTTCCATGCTCAAATCCTTACACATTGGTGGAAGTCAAACATTTCATGAAATTGAAATTTGGTTTAAGGATAACCACAACCGTCTTCATTCTTTGCAAAAAATCACCTTCAGTAAATGCAAAGACCTAAAGGCATTGCCAGATTGGATTTGCAACCTCTCAACACTTCAGTGTCTCAAAATTGTCGATTGCAAGGATTTGGCATTATTGCCTGAAGGAATGTCTCGTCTTACCAACTTACAAACCTTGGAAATCATGGAATGTCCCTTCTTGATTGAAGAATGCCAAACAAAAACAAGTGCAACTTGGCCAAAAATTGCTCACATCCCAAACATAATCATAAAGTATCCTCCTTTCGGCTGA 2331 0.3788 MAEQIPYGVASSIIDRLASAAFRELGLIYGVRDEFESLKTTVESIKAVLLDAEERQERDHAVQIWITRLKDVLYPADDLLDEFSIEDMRHKLDAGHKNKVKEVFHFLSPTPVAFRLKFAHKIEKIRKDFNDVVQEMSILNLSPRVVVVKQSDSVRRETSSFVLESDIIGREDSKKEIISKTALAQLVYNDVEVQNFFEKRMWVCVSDNFDVKTIVKKMLELLTNSQIGDESLEKLQTMLRENLTGKRYLLVLDDIWSESHEKWAQLRTYLMCGTQDSKILVTSRSKIVARTMGVNVPYVLNGLTTEESWDLLKKITFGDDTMGVNQTLESIGKKIAEKCRGVPLAIRTLGGVLQNKNEESEWIGVLQGDFWKLCEEEDSIMPVLKLSYQNLLPQQRQCFAYCSLYPKDWEIEKDDLIQLWMAQGYLECSTEKQLMEDVGNQIVKVFLMKSFFQDAKMNEHGDIMCFKMHDLMHDLAMHVGGNDCCYLDGEAKRLVERPMHLSLEMNAIHLLSSLDAITNIVEISLSVCRNFRYLPPLERLPFLKSLSLHFLDDLEYIYYKESFPGTFFPSLERLIIFFCQKLKGWCRIGDESNDTNSSSNHLLLPPFPRLSYLCINNCSMLIHMPTFPNLDKSLELSDCSMVPLEATLNIAVDFIPFSMLKSLHIGGSQTFHEIEIWFKDNHNRLHSLQKITFSKCKDLKALPDWICNLSTLQCLKIVDCKDLALLPEGMSRLTNLQTLEIMECPFLIEECQTKTSATWPKIAHIPNIIIKYPPFG 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi66g00030 776 Gene3D - 10 129 - -
Sebi66g00030 776 Gene3D - 388 478 IPR036388 -
Sebi66g00030 776 Pfam Rx N-terminal domain 10 97 IPR041118 -
Sebi66g00030 776 SUPERFAMILY L domain-like 454 763 - -
Sebi66g00030 776 Gene3D - 178 299 IPR027417 -
Sebi66g00030 776 CDD RX-CC_like 7 127 IPR038005 -
Sebi66g00030 776 PANTHER DISEASE RESISTANCE PROTEIN RP 37 742 IPR044974 GO:0006952
Sebi66g00030 776 PRINTS Disease resistance protein signature 242 256 - -
Sebi66g00030 776 PRINTS Disease resistance protein signature 339 353 - -
Sebi66g00030 776 PRINTS Disease resistance protein signature 731 747 - -
Sebi66g00030 776 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 402 IPR027417 -
Sebi66g00030 776 Gene3D - 302 387 IPR042197 -
Sebi66g00030 776 FunFam Probable disease resistance protein At1g63360 388 478 - -
Sebi66g00030 776 Pfam NB-ARC domain 180 390 IPR002182 GO:0043531
Sebi66g00030 776 Gene3D Ribonuclease Inhibitor 491 763 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi66g00030 Sebi-Chr66 393750 396552 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi66g00030 178 443 WRKY Transcription Factor Family AT5G45050 26.441 3.16e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi66g00030 - - aprc:113850694 744.962