Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi66g00027 ATGGATGAATTTTGTGAAGGTTCATGTGTTAACCTTGATGACGATAATATATATATTAATGTTACTGGTGATGAATTTGATGTAAACCATAGTGAAGATGAAAATGATTCGGGTGGTCCTAGTGTGGAGGAAGAGTTAGGTAGAATGGATCATAGAGGTAAAAGAATGGAAGATTTGACTCCTGTTGATATTCGAAACATGGAGTTTGCTAGTGAAGAGCATGGTGAGATATTTTATAGGGCATATGCAAAGCGTCATGGATTTGTTGTTAGAAAGGATGAGATTGATCGGGACATTAAGGGCAATGTTATTATGCGTCAGTTTGTTTGCAACAAAGAGGGTAATAGGAACAAAAAACATTTGATGAGGGTGGATAGGAAAAAAAATAGGCCATTAACGCGTCTGGATTGTCAAGCTAAGATACGAATTCACTTAGATTATAAGACAGATAAATGGAAAGCGGTTTCTTTTGTGGAGACCCACAATCATGAGCTTACCCCTTCTACTTTTGTGCACTTACTACCTAGTAATAGAGGGTTGAATAATGCTGATAAAGCCCAAGTAGGGAGGTTGCATGCATATGGTGTTAGAACGTGTCACATAATGGGGTACATGCTAGATCAAAAAGGGGGTTATGGTTCCCTTGGGTTCTGTAGAAAGGATCTGTATAATTATATTGAACGACAGAAGCTAGAAAAGATTAAAGATGGGGATGCACATTCTGCCTTATGTTACATACAAGCAAAGGCAAACAATGATCCCACGCTTCGAGCTAGTTTCCTTGCTTCCGAGGACGCTGCAGTAGTTACAGATGGAGATAGTAGTATGAGAGAAGCTATCAAGCAGGTGTTCCCCAATGCATCACATCGCCTTTGTGCATGGCATTTGCACAAAAATGCGTGTGAAAATGTCAAGAATGCTGGTTTTTTGGACGATTTCAAGGTAGCCATGTATTCTAATTTCACTGAGGATCAATTTGAATTATTTTGGAAGCGAATGGTGGCAAAGCATGGACTTGTAGGAAATAAGTGGGTGTCAAAAACCTATGAGAATAGATCATTGTGGGCCACTGCTTATTTCCGAGATAAATTTTTTGGCCGTATTAGAACAACATCACAGTGTGAGGCTATTAATTCCCTGGTGAAGGCATATGTTAATAAAAAAGATACCATTTTTGAATTCATCAATAGGTTTGAGCAAGTGTTGAGAGAATATAGGAACAATGAGATGATTGCAGATTTCAAAAATCTATTTACGGAGCCAGTCTTAACTACCTCTCTTTGCAAAATTAAGAGTGAGGCGTCAAAAATATTCACATTAGAGATTTTTTGGGAAGTGAAATCTGAGATTGAGGTTGTAGGTGCTTTGAATGTAAATGAACGTCTTGATCAGGGAGATAAATTGATTTTTAAGATGAGCCATTACTGTAATCGCGGAAGTGAATTTCAGGTTGAGTATGATGTAGTGAATTCAAAATTTGTATGTGAATGTAGACTGTTTGAGAGTCGAGGAATCCCTTGTTCTCATATTATATGTGTCATTAGAATCTTGAAAGCATTAACCCACAAAATGGAAGACCACTAA 1584 0.3775 MDEFCEGSCVNLDDDNIYINVTGDEFDVNHSEDENDSGGPSVEEELGRMDHRGKRMEDLTPVDIRNMEFASEEHGEIFYRAYAKRHGFVVRKDEIDRDIKGNVIMRQFVCNKEGNRNKKHLMRVDRKKNRPLTRLDCQAKIRIHLDYKTDKWKAVSFVETHNHELTPSTFVHLLPSNRGLNNADKAQVGRLHAYGVRTCHIMGYMLDQKGGYGSLGFCRKDLYNYIERQKLEKIKDGDAHSALCYIQAKANNDPTLRASFLASEDAAVVTDGDSSMREAIKQVFPNASHRLCAWHLHKNACENVKNAGFLDDFKVAMYSNFTEDQFELFWKRMVAKHGLVGNKWVSKTYENRSLWATAYFRDKFFGRIRTTSQCEAINSLVKAYVNKKDTIFEFINRFEQVLREYRNNEMIADFKNLFTEPVLTTSLCKIKSEASKIFTLEIFWEVKSEIEVVGALNVNERLDQGDKLIFKMSHYCNRGSEFQVEYDVVNSKFVCECRLFESRGIPCSHIICVIRILKALTHKMEDH 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi66g00027 527 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 61 516 IPR031052 GO:0006355
Sebi66g00027 527 SMART 26again6 493 520 IPR006564 GO:0008270
Sebi66g00027 527 Pfam MULE transposase domain 263 299 IPR018289 -
Sebi66g00027 527 ProSiteProfiles Zinc finger SWIM-type profile. 482 518 IPR007527 GO:0008270
Sebi66g00027 527 MobiDBLite consensus disorder prediction 29 53 - -
Sebi66g00027 527 Pfam FAR1 DNA-binding domain 78 166 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi66g00027 Sebi-Chr66 342433 344265 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi66g00027 FAR1 4.8e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi66g00027 - - vvo:131613837 445.277