Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi668g00012 ATGTCTACCCATACAAAGACTACCAATCAAGGCACAGGGAGTGGCACTAGCTCCCGAAGTGACAGTTTAAAGAGCACCAGTGCACCCATTAGGCCACATACTGATGGTAATGTAAGGTGGGATGCAATTAACATGGTTTCCAAGAGTGGCCCTCACAATCTTAGCCATTTCAGGCTTCTCAAACGCATTGGTTATGGAGACATTGGAAGTGTGTATCTTGTGGAACTAAGAGGAACTAATGCCCACTTTGCCATGAAAGTAATGGACAAGGAAGCTCTTATAAGCAGAAATAAGCTTCTGCGAGCACACACAGAAAGGGAGATTCTTGGACTTCTTGATCACCCCTTCTTGCCAACTTCATATTCTTACTTTGAAACTGATAAGTTTTACTTTTTGGTCATGGAGTTCTGTAGTGGGGGTGATCTTCATTCTGTTCGACAAAAGCAACCAAACAAGTGTTTCCCTGAAGAAGCTGTAAGATCAAGAATTCCTTGTGATAGGTTTTATGCTTCAGAGGTTTTGTTGGCTCTTGAGTACCTGCACATGCTTGGCATTGTATACAGAGACTTAAAGCCAGAGAATCTTCTAGTCAGAGATGAAGGGCATATCATGCTCTCAGATTTTGATTTATCACTTCGCTGCTCTATCAGTCCTACATTAGTCACCTACCAATGCAGGCAATGGTGGTGGTGGTGA 696 0.4296 MSTHTKTTNQGTGSGTSSRSDSLKSTSAPIRPHTDGNVRWDAINMVSKSGPHNLSHFRLLKRIGYGDIGSVYLVELRGTNAHFAMKVMDKEALISRNKLLRAHTEREILGLLDHPFLPTSYSYFETDKFYFLVMEFCSGGDLHSVRQKQPNKCFPEEAVRSRIPCDRFYASEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSISPTLVTYQCRQWWWW 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi668g00012 231 PANTHER FLIPPASE KINASE 1-RELATED 13 225 - -
Sebi668g00012 231 FunFam Serine/threonine-protein kinase D6PK-like 55 140 - -
Sebi668g00012 231 Pfam Protein kinase domain 58 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi668g00012 231 Gene3D Transferase(Phosphotransferase) domain 1 141 215 - -
Sebi668g00012 231 Gene3D Phosphorylase Kinase; domain 1 55 140 - -
Sebi668g00012 231 SUPERFAMILY Protein kinase-like (PK-like) 41 225 IPR011009 -
Sebi668g00012 231 FunFam Serine/threonine-protein kinase OXI1 141 216 - -
Sebi668g00012 231 ProSiteProfiles Protein kinase domain profile. 57 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi668g00012 231 MobiDBLite consensus disorder prediction 1 32 - -
Sebi668g00012 231 SMART serkin_6 57 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi668g00012 231 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Sebi668g00012 231 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi668g00012 Sebi-Chr668 544152 545144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi668g00012 14 221 AGC Kinase Gene Family AT3G12690 73.810 6.56e-104 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sebi668g00012 Pkinase 1.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi668g00012 - - vvo:131637783 355.14